Simultaneous enumeration of cancer and immune cell types from bulk tumor gene expression data von Racle, Julien, de Jonge, Kaat, Baumgaertner, Petra, Speiser, Daniel E, Gfeller, David

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Ipilimumab-dependent cell-mediated cytotoxicity of regulatory T cells ex vivo by nonclassical monocytes in melanoma patients von Romano, Emanuela, Kusio-Kobialka, Monika, Foukas, Periklis G., Baumgaertner, Petra, Meyer, Christiane, Ballabeni, Pierluigi, Michielin, Olivier, Weide, Benjamin, Romero, Pedro, Speiser, Daniel E.

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Sensitive identification of neoantigens and cognate TCRs in human solid tumors von Arnaud, Marion, Chiffelle, Johanna, Genolet, Raphael, Navarro Rodrigo, Blanca, Perez, Marta A. S., Huber, Florian, Magnin, Morgane, Nguyen-Ngoc, Tu, Guillaume, Philippe, Baumgaertner, Petra, Chong, Chloe, Stevenson, Brian J., Gfeller, David, Irving, Melita, Speiser, Daniel E., Schmidt, Julien, Zoete, Vincent, Kandalaft, Lana E., Bassani-Sternberg, Michal, Bobisse, Sara, Coukos, George, Harari, Alexandre

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Circulating CD56bright NK cells inversely correlate with survival of melanoma patients von de Jonge, Kaat, Ebering, Anna, Nassiri, Sina, Maby-El Hajjami, Hélène, Ouertatani-Sakouhi, Hajer, Baumgaertner, Petra, Speiser, Daniel E.

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Neoantigen-specific CD8 T cells with high structural avidity preferentially reside in and eliminate tumors von Schmidt, Julien, Chiffelle, Johanna, Perez, Marta A. S., Magnin, Morgane, Bobisse, Sara, Arnaud, Marion, Genolet, Raphael, Cesbron, Julien, Barras, David, Navarro Rodrigo, Blanca, Benedetti, Fabrizio, Michel, Alexandra, Queiroz, Lise, Baumgaertner, Petra, Guillaume, Philippe, Hebeisen, Michael, Michielin, Olivier, Nguyen-Ngoc, Tu, Huber, Florian, Irving, Melita, Tissot-Renaud, Stéphanie, Stevenson, Brian J., Rusakiewicz, Sylvie, Dangaj Laniti, Denarda, Bassani-Sternberg, Michal, Rufer, Nathalie, Gfeller, David, Kandalaft, Lana E., Speiser, Daniel E., Zoete, Vincent, Coukos, George, Harari, Alexandre

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Extended co-expression of inhibitory receptors by human CD8 T-cells depending on differentiation, antigen-specificity and anatomical localization von Baitsch, Lukas, Legat, Amandine, Barba, Leticia, Fuertes Marraco, Silvia A, Rivals, Jean-Paul, Baumgaertner, Petra, Christiansen-Jucht, Céline, Bouzourene, Hanifa, Rimoldi, Donata, Pircher, Hanspeter, Rufer, Nathalie, Matter, Maurice, Michielin, Olivier, Speiser, Daniel E

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Very Late Antigen-1 Marks Functional Tumor-Resident CD8 T Cells and Correlates with Survival of Melanoma Patients von Murray, Timothy, Fuertes Marraco, Silvia A, Baumgaertner, Petra, Bordry, Natacha, Cagnon, Laurène, Donda, Alena, Romero, Pedro, Verdeil, Grégory, Speiser, Daniel E

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CD8 T cell function and cross-reactivity explored by stepwise increased peptide-HLA versus TCR affinity von Baumgaertner, Petra, Schmidt, Julien, Costa-Nunes, Carla-Marisa, Bordry, Natacha, Guillaume, Philippe, Luescher, Immanuel, Speiser, Daniel E, Rufer, Nathalie, Hebeisen, Michael

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Unmodified self antigen triggers human CD8 T cells with stronger tumor reactivity than altered antigen von Speiser, Daniel E, Baumgaertner, Petra, Voelter, Verena, Devevre, Estelle, Barbey, Catherine, Rufer, Nathalie, Romero, Pedro

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Inflammatory B cells correlate with failure to checkpoint blockade in melanoma patients von de Jonge, Kaat, Tillé, Laure, Lourenco, Joao, Maby-El Hajjami, Hélène, Nassiri, Sina, Racle, Julien, Gfeller, David, Delorenzi, Mauro, Verdeil, Grégory, Baumgaertner, Petra, Speiser, Daniel E.

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Rapid and Continued T-Cell Differentiation into Long-term Effector and Memory Stem Cells in Vaccinated Melanoma Patients von Gannon, Philippe O, Baumgaertner, Petra, Huber, Alexandre, Iancu, Emanuela M, Cagnon, Laurène, Abed Maillard, Samia, Maby-El Hajjami, Hélène, Speiser, Daniel E, Rufer, Nathalie

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Unsupervised Analysis of Flow Cytometry Data in a Clinical Setting Captures Cell Diversity and Allows Population Discovery von Baumgaertner, Petra, Sankar, Martial, Herrera, Fernanda, Benedetti, Fabrizio, Barras, David, Thierry, Anne-Christine, Dangaj, Denarda, Kandalaft, Lana E., Coukos, George, Xenarios, Ioannis, Guex, Nicolas, Harari, Alexandre

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High Peptide Dose Vaccination Promotes the Early Selection of Tumor Antigen-Specific CD8 T-Cells of Enhanced Functional Competence von Carretero-Iglesia, Laura, Couturaud, Barbara, Baumgaertner, Petra, Schmidt, Julien, Maby-El Hajjami, Helene, Speiser, Daniel E., Hebeisen, Michael, Rufer, Nathalie

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Broad and Conserved Immune Regulation by Genetically Heterogeneous Melanoma Cells von Neubert, Natalie J, Tillé, Laure, Barras, David, Soneson, Charlotte, Baumgaertner, Petra, Rimoldi, Donata, Gfeller, David, Delorenzi, Mauro, Fuertes Marraco, Silvia A, Speiser, Daniel E

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Explaining juvenile idiopathic arthritis to paediatric patients using illustrations and easy-to-read texts: improvement of disease knowledge and adherence to treatment von Reiser, Christiane, Zeltner, Nina A., Rettenbacher, Beatrix, Baumgaertner, Petra, Huemer, Martina, Huemer, Christian

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Lymphatic vessel density is associated with CD8+ T cell infiltration and immunosuppressive factors in human melanoma von Bordry, Natacha, Broggi, Maria A. S., de Jonge, Kaat, Schaeuble, Karin, Gannon, Philippe O., Foukas, Periklis G., Danenberg, Esther, Romano, Emanuela, Baumgaertner, Petra, Fankhauser, Manuel, Wald, Noémie, Cagnon, Laurène, Abed-Maillard, Samia, Hajjami, Hélène Maby-El, Murray, Timothy, Ioannidou, Kalliopi, Letovanec, Igor, Yan, Pu, Michielin, Olivier, Matter, Maurice, Swartz, Melody A., Speiser, Daniel E.

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Low Avidity T Cells Do Not Hinder High Avidity T Cell Responses Against Melanoma von Ioannidou, Kalliopi, Randin, Olivier, Semilietof, Aikaterini, Maby-El Hajjami, Hélène, Baumgaertner, Petra, Vanhecke, Dominique, Speiser, Daniel E

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A Well-Controlled Experimental System to Study Interactions of Cytotoxic T Lymphocytes with Tumor Cells von Neubert, Natalie J, Soneson, Charlotte, Barras, David, Baumgaertner, Petra, Rimoldi, Donata, Delorenzi, Mauro, Fuertes Marraco, Silvia A, Speiser, Daniel E

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Deciphering the Mechanisms of Improved Immunogenicity of Hypochlorous Acid-Treated Antigens in Anti-Cancer Dendritic Cell-Based Vaccines von Graciotti, Michele, Marino, Fabio, Pak, HuiSong, Baumgaertner, Petra, Thierry, Anne-Christine, Chiffelle, Johanna, Perez, Marta A. S., Zoete, Vincent, Harari, Alexandre, Bassani-Sternberg, Michal, Kandalaft, Lana E.

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Differentiation associated regulation of microRNA expression in vivo in human CD8+ T cell subsets von Salaun, Bruno, Yamamoto, Takuya, Badran, Bassam, Tsunetsugu-Yokota, Yasuko, Roux, Antoine, Baitsch, Lukas, Rouas, Redouane, Fayyad-Kazan, Hussein, Baumgaertner, Petra, Devevre, Estelle, Ramesh, Anirudh, Braun, Marion, Speiser, Daniel, Autran, Brigitte, Martiat, Philippe, Appay, Victor, Romero, Pedro

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