The reduction of DSS-induced colitis severity in mice exposed to cigarette smoke is linked to immune modulation and microbial shifts von Lo Sasso, Giuseppe, Phillips, Blaine W., Sewer, Alain, Battey, James N. D., Kondylis, Athanasios, Talikka, Marja, Titz, Bjoern, Guedj, Emmanuel, Peric, Dariusz, Bornand, David, Dulize, Remi, Merg, Celine, Corciulo, Maica, Ouadi, Sonia, Yanuar, Rendy, Tung, Ching Keong, Ivanov, Nikolai V., Peitsch, Manuel C., Hoeng, Julia

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Crowdsourced benchmarking of taxonomic metagenome profilers: lessons learned from the sbv IMPROVER Microbiomics challenge von Poussin, Carine, Khachatryan, Lusine, Sierro, Nicolas, Narsapuram, Vijay Kumar, Meyer, Fernando, Kaikala, Vinay, Chawla, Vandna, Muppirala, Usha, Kumar, Sunil, Belcastro, Vincenzo, Battey, James N. D, Scotti, Elena, Boué, Stéphanie, McHardy, Alice C, Peitsch, Manuel C, Ivanov, Nikolai V, Hoeng, Julia

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The tobacco genome sequence and its comparison with those of tomato and potato von Sierro, Nicolas, Battey, James N.D., Ouadi, Sonia, Bakaher, Nicolas, Bovet, Lucien, Willig, Adrian, Goepfert, Simon, Peitsch, Manuel C., Ivanov, Nikolai V.

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Reference genomes and transcriptomes of Nicotiana sylvestris and Nicotiana tomentosiformis von Sierro, Nicolas, Battey, James N D, Ouadi, Sonia, Bovet, Lucien, Goepfert, Simon, Bakaher, Nicolas, Peitsch, Manuel C, Ivanov, Nikolai V

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Impact of 6-Month Exposure to Aerosols From Potential Modified Risk Tobacco Products Relative to Cigarette Smoke on the Rodent Gastrointestinal Tract von Battey, James N. D., Szostak, Justyna, Phillips, Blaine, Teng, Charles, Tung, Ching Keong, Lim, Wei Ting, Yeo, Ying Shan, Ouadi, Sonia, Baumer, Karine, Thomas, Jerome, Martinis, Jacopo, Sierro, Nicolas, Ivanov, Nikolai, Vanscheeuwijck, Patrick, Peitsch, Manuel C., Hoeng, Julia

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A Literature Review and Framework Proposal for Halitosis Assessment in Cigarette Smokers and Alternative Nicotine-Delivery Products Users von Zanetti, Filippo, Zivkovic Semren, Tanja, Battey, James N D, Guy, Philippe A, Ivanov, Nikolai V, van der Plas, Angela, Hoeng, Julia

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Dissection of Cancer Mutational Signatures with Individual Components of Cigarette Smoking von Mingard, Cécile, Battey, James N. D., Takhaveev, Vakil, Blatter, Katharina, Hürlimann, Vera, Sierro, Nicolas, Ivanov, Nikolai V., Sturla, Shana J.

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Assessment of CASP7 predictions for template-based modeling targets von Kopp, Jürgen, Bordoli, Lorenza, Battey, James N.D., Kiefer, Florian, Schwede, Torsten

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Metabolic networks of the Nicotiana genus in the spotlight: content, progress and outlook von Foerster, Hartmut, Battey, James N. D., Sierro, Nicolas, Ivanov, Nikolai, Mueller, Lukas A.

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Automated server predictions in CASP7 von Battey, James N. D., Kopp, Jürgen, Bordoli, Lorenza, Read, Randy J., Clarke, Neil D., Schwede, Torsten

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SolCyc: a database hub at the Sol Genomics Network (SGN) for the manual curation of metabolic networks in Solanum and Nicotiana specific databases von Foerster, Hartmut, Bombarely, Aureliano, Battey, James N D, Sierro, Nicolas, Ivanov, Nikolai V, Mueller, Lukas A

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Effect of switching from cigarette smoking to the use of the tobacco heating system on periodontitis treatment outcome: Periodontal parameter results from a multicenter Japanese st... von Pouly, Sandrine, Ng, Wee Teck, Blanc, Nicolas, Hession, Paul, Zanetti, Filippo, Battey, James N. D., de La Bourdonnaye, Guillaume, Heremans, Annie, Haziza, Christelle

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Discriminating Spontaneous From Cigarette Smoke and THS 2.2 Aerosol Exposure-Related Proliferative Lung Lesions in A/J Mice by Using Gene Expression and Mutation Spectrum Data von Xiang, Yang, Luettich, Karsta, Martin, Florian, Battey, James N D, Trivedi, Keyur, Neau, Laurent, Wong, Ee Tsin, Guedj, Emmanuel, Dulize, Remi, Peric, Dariusz, Bornand, David, Ouadi, Sonia, Sierro, Nicolas, Büttner, Ansgar, Ivanov, Nikolai V, Vanscheeuwijck, Patrick, Hoeng, Julia, Peitsch, Manuel C

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Inflammatory Bowel Disease–Associated Changes in the Gut: Focus on Kazan Patients von Lo Sasso, Giuseppe, Khachatryan, Lusine, Kondylis, Athanasios, Battey, James N D, Sierro, Nicolas, Danilova, Natalia A, Grigoryeva, Tatiana V, Markelova, Maria I, Khusnutdinova, Dilyara R, Laikov, Alexander V, Salafutdinov, Ilnur I, Romanova, Yulia D, Siniagina, Mariia N, Vasiliev, Ilya Yu, Boulygina, Eugenia A, Solovyeva, Valeriya V, Garanina, Ekaterina E, Kitaeva, Kristina V, Ivanov, Konstantin Y, Chulpanova, Darja S, Kletenkov, Konstantin S, Valeeva, Alina R, Odintsova, Alfiya Kh, Ardatskaya, Maria D, Abdulkhakov, Rustam A, Ivanov, Nikolai V, Peitsch, Manuel C, Hoeng, Julia, Abdulkhakov, Sayar R

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Metabolic networks of the Nicotiana genus in the spotlight: content, progress and outlook von Foerster, Hartmut, Battey, James N. D., Sierro, Nicolas, Ivanov, Nikolai, Mueller, Lukas A.

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Determinants of Functionality in the Ubiquitin Conjugating Enzyme Family von Winn, Peter J., Religa, Tomasz L., Battey, James N.D., Banerjee, Amit, Wade, Rebecca C.

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Additional file 1 of Crowdsourced benchmarking of taxonomic metagenome profilers: lessons learned from the sbv IMPROVER Microbiomics challenge von Poussin, Carine, Khachatryan, Lusine, Sierro, Nicolas, Narsapuram, Vijay Kumar, Meyer, Fernando, Kaikala, Vinay, Chawla, Vandna, Muppirala, Usha, Kumar, Sunil, Belcastro, Vincenzo, Battey, James N. D., Scotti, Elena, Boué, Stéphanie, McHardy, Alice C., Peitsch, Manuel C., Ivanov, Nikolai V., Hoeng, Julia

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Additional file 5 of Crowdsourced benchmarking of taxonomic metagenome profilers: lessons learned from the sbv IMPROVER Microbiomics challenge von Poussin, Carine, Khachatryan, Lusine, Sierro, Nicolas, Narsapuram, Vijay Kumar, Meyer, Fernando, Kaikala, Vinay, Chawla, Vandna, Muppirala, Usha, Kumar, Sunil, Belcastro, Vincenzo, Battey, James N. D., Scotti, Elena, Boué, Stéphanie, McHardy, Alice C., Peitsch, Manuel C., Ivanov, Nikolai V., Hoeng, Julia

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Additional file 2 of Crowdsourced benchmarking of taxonomic metagenome profilers: lessons learned from the sbv IMPROVER Microbiomics challenge von Poussin, Carine, Khachatryan, Lusine, Sierro, Nicolas, Narsapuram, Vijay Kumar, Meyer, Fernando, Kaikala, Vinay, Chawla, Vandna, Muppirala, Usha, Kumar, Sunil, Belcastro, Vincenzo, Battey, James N. D., Scotti, Elena, Boué, Stéphanie, McHardy, Alice C., Peitsch, Manuel C., Ivanov, Nikolai V., Hoeng, Julia

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Clinician judgment vs formal scales for predicting intracerebral hemorrhage outcomes von Hwang, David Y, Dell, Cameron A, Sparks, Mary J, Watson, Tiffany D, Langefeld, Carl D, Comeau, Mary E, Rosand, Jonathan, Battey, Thomas W.K, Koch, Sebastian, Perez, Mario L, James, Michael L, McFarlin, Jessica, Osborne, Jennifer L, Woo, Daniel, Kittner, Steven J, Sheth, Kevin N

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