Marker-free carotenoid-enriched rice generated through targeted gene insertion using CRISPR-Cas9 von Dong, Oliver Xiaoou, Yu, Shu, Jain, Rashmi, Zhang, Nan, Duong, Phat Q., Butler, Corinne, Li, Yan, Lipzen, Anna, Martin, Joel A., Barry, Kerrie W., Schmutz, Jeremy, Tian, Li, Ronald, Pamela C.

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Comparative genomics and transcriptomics depict ericoid mycorrhizal fungi as versatile saprotrophs and plant mutualists von Martino, Elena, Morin, Emmanuelle, Grelet, Gwen‐Aëlle, Kuo, Alan, Kohler, Annegret, Daghino, Stefania, Barry, Kerrie W., Cichocki, Nicolas, Clum, Alicia, Dockter, Rhyan B., Hainaut, Matthieu, Kuo, Rita C., LaButti, Kurt, Lindahl, Björn D., Lindquist, Erika A., Lipzen, Anna, Khouja, Hassine‐Radhouane, Magnuson, Jon, Murat, Claude, Ohm, Robin A., Singer, Steven W., Spatafora, Joseph W., Wang, Mei, Veneault‐Fourrey, Claire, Henrissat, Bernard, Grigoriev, Igor V., Martin, Francis M., Perotto, Silvia

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Genetic determinants of endophytism in the Arabidopsis root mycobiome von Mesny, Fantin, Miyauchi, Shingo, Thiergart, Thorsten, Pickel, Brigitte, Atanasova, Lea, Karlsson, Magnus, Hüttel, Bruno, Barry, Kerrie W., Haridas, Sajeet, Chen, Cindy, Bauer, Diane, Andreopoulos, William, Pangilinan, Jasmyn, LaButti, Kurt, Riley, Robert, Lipzen, Anna, Clum, Alicia, Drula, Elodie, Henrissat, Bernard, Kohler, Annegret, Grigoriev, Igor V., Martin, Francis M., Hacquard, Stéphane

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The Sequences of 1504 Mutants in the Model Rice Variety Kitaake Facilitate Rapid Functional Genomic Studies von Li, Guotian, Jain, Rashmi, Chern, Mawsheng, Pham, Nikki T., Martin, Joel A., Wei, Tong, Schackwitz, Wendy S., Lipzen, Anna M., Duong, Phat Q., Jones, Kyle C., Jiang, Liangrong, Ruan, Deling, Bauer, Diane, Peng, Yi, Barry, Kerrie W., Schmutz, Jeremy, Ronald, Pamela C.

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Fungal and plant gene expression in the Tulasnella calospora–Serapias vomeracea symbiosis provides clues about nitrogen pathways in orchid mycorrhizas von Fochi, Valeria, Chitarra, Walter, Kohler, Annegret, Voyron, Samuele, Singan, Vasanth R., Lindquist, Erika A., Barry, Kerrie W., Girlanda, Mariangela, Grigoriev, Igor V., Martin, Francis, Balestrini, Raffaella, Perotto, Silvia

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Ectomycorrhizal ecology is imprinted in the genome of the dominant symbiotic fungus Cenococcum geophilum von Peter, Martina, Kohler, Annegret, Ohm, Robin A., Kuo, Alan, Krützmann, Jennifer, Morin, Emmanuelle, Arend, Matthias, Barry, Kerrie W., Binder, Manfred, Choi, Cindy, Clum, Alicia, Copeland, Alex, Grisel, Nadine, Haridas, Sajeet, Kipfer, Tabea, LaButti, Kurt, Lindquist, Erika, Lipzen, Anna, Maire, Renaud, Meier, Barbara, Mihaltcheva, Sirma, Molinier, Virginie, Murat, Claude, Pöggeler, Stefanie, Quandt, C. Alisha, Sperisen, Christoph, Tritt, Andrew, Tisserant, Emilie, Crous, Pedro W., Henrissat, Bernard, Nehls, Uwe, Egli, Simon, Spatafora, Joseph W., Grigoriev, Igor V., Martin, Francis M.

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Genome-Wide Sequencing of 41 Rice (Oryza sativa L.) Mutated Lines Reveals Diverse Mutations Induced by Fast-Neutron Irradiation von Li, Guotian, Chern, Mawsheng, Jain, Rashmi, Martin, Joel A., Schackwitz, Wendy S., Jiang, Liangrong, Vega-Sánchez, Miguel E., Lipzen, Anna M., Barry, Kerrie W., Schmutz, Jeremy, Ronald, Pamela C.

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Genome sequence of the model rice variety KitaakeX von Jain, Rashmi, Jenkins, Jerry, Shu, Shengqiang, Chern, Mawsheng, Martin, Joel A, Copetti, Dario, Duong, Phat Q, Pham, Nikki T, Kudrna, David A, Talag, Jayson, Schackwitz, Wendy S, Lipzen, Anna M, Dilworth, David, Bauer, Diane, Grimwood, Jane, Nelson, Catherine R, Xing, Feng, Xie, Weibo, Barry, Kerrie W, Wing, Rod A, Schmutz, Jeremy, Li, Guotian, Ronald, Pamela C

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Evolutionary transition to the ectomycorrhizal habit in the genomes of a hyperdiverse lineage of mushroom‐forming fungi von Looney, Brian, Miyauchi, Shingo, Morin, Emmanuelle, Drula, Elodie, Courty, Pierre Emmanuel, Kohler, Annegret, Kuo, Alan, LaButti, Kurt, Pangilinan, Jasmyn, Lipzen, Anna, Riley, Robert, Andreopoulos, William, He, Guifen, Johnson, Jenifer, Nolan, Matt, Tritt, Andrew, Barry, Kerrie W., Grigoriev, Igor V., Nagy, László G., Hibbett, David, Henrissat, Bernard, Matheny, P. Brandon, Labbé, Jesse, Martin, Francis M.

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Metagenomic Profiling Reveals Lignocellulose Degrading System in a Microbial Community Associated with a Wood-Feeding Beetle von Scully, Erin D, Geib, Scott M, Hoover, Kelli, Tien, Ming, Tringe, Susannah G, Barry, Kerrie W, Glavina del Rio, Tijana, Chovatia, Mansi, Herr, Joshua R, Carlson, John E, Oliveira, Pedro Lagerblad

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An ectomycorrhizal fungus alters sensitivity to jasmonate, salicylate, gibberellin, and ethylene in host roots von Basso, Veronica, Kohler, Annegret, Miyauchi, Shingo, Singan, Vasanth, Guinet, Frédéric, Šimura, Jan, Novák, Ondřej, Barry, Kerrie W., Amirebrahimi, Mojgan, Block, Jonathan, Daguerre, Yohann, Na, Hyunsoo, Grigoriev, Igor V., Martin, Francis, Veneault‐Fourrey, Claire

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Analysis of clock-regulated genes in Neurospora reveals widespread posttranscriptional control of metabolic potential von Hurley, Jennifer M., Dasgupta, Arko, Emerson, Julian M., Zhou, Xiaoying, Ringelberg, Carol S., Knabe, Nicole, Lipzen, Anna M., Lindquist, Erika A., Daum, Christopher G., Barry, Kerrie W., Grigoriev, Igor V., Smith, Kristina M., Galagan, James E., Bell-Pedersen, Deborah, Freitag, Michael, Cheng, Chao, Loros, Jennifer J., Dunlap, Jay C.

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Genome-wide associations with flowering time in switchgrass using exome-capture sequencing data von Grabowski, Paul P., Evans, Joseph, Daum, Chris, Deshpande, Shweta, Barry, Kerrie W., Kennedy, Megan, Ramstein, Guillaume, Kaeppler, Shawn M., Buell, C. Robin, Jiang, Yiwei, Casler, Michael D.

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Metagenomic analysis of two enhanced biological phosphorus removal (EBPR) sludge communities von Hugenholtz, Philip, Martín, Héctor García, Ivanova, Natalia, Kunin, Victor, Warnecke, Falk, Barry, Kerrie W, McHardy, Alice C, Yeates, Christine, He, Shaomei, Salamov, Asaf A, Szeto, Ernest, Dalin, Eileen, Putnam, Nik H, Shapiro, Harris J, Pangilinan, Jasmyn L, Rigoutsos, Isidore, Kyrpides, Nikos C, Blackall, Linda Louise, McMahon, Katherine D

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Genome-Wide Analysis of Corynespora cassiicola Leaf Fall Disease Putative Effectors von Lopez, David, Ribeiro, Sébastien, Label, Philippe, Fumanal, Boris, Venisse, Jean-Stéphane, Kohler, Annegret, de Oliveira, Ricardo R, Labutti, Kurt, Lipzen, Anna, Lail, Kathleen, Bauer, Diane, Ohm, Robin A, Barry, Kerrie W, Spatafora, Joseph, Grigoriev, Igor V, Martin, Francis M, Pujade-Renaud, Valérie

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Symbiosis insights through metagenomic analysis of a microbial consortium von Rubin, Edward M, Dubilier, Nicole, Woyke, Tanja, Teeling, Hanno, Ivanova, Natalia N, Huntemann, Marcel, Richter, Michael, Gloeckner, Frank Oliver, Boffelli, Dario, Anderson, Iain J, Barry, Kerrie W, Shapiro, Harris J, Szeto, Ernest, Kyrpides, Nikos C, Mussmann, Marc, Amann, Rudolf, Bergin, Claudia, Ruehland, Caroline

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An insect herbivore microbiome with high plant biomass-degrading capacity von Suen, Garret, Scott, Jarrod J, Aylward, Frank O, Adams, Sandra M, Tringe, Susannah G, Pinto-Tomás, Adrián A, Foster, Clifton E, Pauly, Markus, Weimer, Paul J, Barry, Kerrie W, Goodwin, Lynne A, Bouffard, Pascal, Li, Lewyn, Osterberger, Jolene, Harkins, Timothy T, Slater, Steven C, Donohue, Timothy J, Currie, Cameron R

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Comparative genomics of xylose-fermenting fungi for enhanced biofuel production von Wohlbach, Dana J, Kuo, Alan, Sato, Trey K, Potts, Katlyn M, Salamov, Asaf A, LaButti, Kurt M, Sun, Hui, Clum, Alicia, Pangilinan, Jasmyn L, Lindquist, Erika A, Lucas, Susan, Lapidus, Alla, Jin, Mingjie, Gunawan, Christa, Balan, Venkatesh, Dale, Bruce E, Jeffries, Thomas W, Zinkel, Robert, Barry, Kerrie W, Grigoriev, Igor V, Gasch, Audrey P

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The genetics of divergence and reproductive isolation between ecotypes of Panicum hallii von Lowry, David B., Hernandez, Kyle, Taylor, Samuel H., Meyer, Eli, Logan, Tierney L., Barry, Kerrie W., Chapman, Jarrod A., Rokhsar, Daniel S., Schmutz, Jeremy, Juenger, Thomas E.

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Leucoagaricus gongylophorus Produces Diverse Enzymes for the Degradation of Recalcitrant Plant Polymers in Leaf-Cutter Ant Fungus Gardens von AYLWARD, Frank O, BURNUM-JOHNSON, Kristin E, MALFATTI, Stephanie A, MONROE, Matthew E, PURVINE, Samuel O, GOODWIN, Lynne A, SMITH, Richard D, WEINSTOCK, George M, GERARDO, Nicole M, SUEN, Garret, LIPTON, Mary S, CURRIE, Cameron R, TRINGE, Susannah G, TEILING, Clotilde, TREMMEL, Daniel M, MOELLER, Joseph A, SCOTT, Jarrod J, BARRY, Kerrie W, PIEHOWSKI, Paul D, NICORA, Carrie D

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