In silico toxicology: computational methods for the prediction of chemical toxicity von Raies, Arwa B., Bajic, Vladimir B.

Volltext

On the classification of long non-coding RNAs von Ma, Lina, Bajic, Vladimir B., Zhang, Zhang

Volltext

Glutathione “Redox Homeostasis” and Its Relation to Cardiovascular Disease von Isenovic, Esma R., Bajic, Vladimir, Radak, Djordje, Zafirovic, Sonja, Obradovic, Milan, Van Neste, Christophe, Bajic, Vladan P., Essack, Magbubah

Volltext

DDR: efficient computational method to predict drug-target interactions using graph mining and machine learning approaches von Olayan, Rawan S, Ashoor, Haitham, Bajic, Vladimir B

Volltext

DWFS: a wrapper feature selection tool based on a parallel genetic algorithm von Soufan, Othman, Kleftogiannis, Dimitrios, Kalnis, Panos, Bajic, Vladimir B

Volltext

LncBook: a curated knowledgebase of human long non-coding RNAs von Ma, Lina, Cao, Jiabao, Liu, Lin, Du, Qiang, Li, Zhao, Zou, Dong, Bajic, Vladimir B, Zhang, Zhang

Volltext

Change of Circulating and Tissue-Based miR-20a in Human Cancers and Associated Prognostic Implication: A Systematic Review and Meta-Analysis von Li, Zirong, Liu, Lihua, Gao, Fuqiang, Sun, Wei, Wang, Qiwei, Zhang, Qingyu, Cheng, Liming

Volltext

DEEP: a general computational framework for predicting enhancers von Kleftogiannis, Dimitrios, Kalnis, Panos, Bajic, Vladimir B

Volltext

HOCOMOCO: towards a complete collection of transcription factor binding models for human and mouse via large-scale ChIP-Seq analysis von Kulakovskiy, Ivan V, Vorontsov, Ilya E, Yevshin, Ivan S, Sharipov, Ruslan N, Fedorova, Alla D, Rumynskiy, Eugene I, Medvedeva, Yulia A, Magana-Mora, Arturo, Bajic, Vladimir B, Papatsenko, Dmitry A, Kolpakov, Fedor A, Makeev, Vsevolod J

Volltext

Progress and challenges in bioinformatics approaches for enhancer identification von Kleftogiannis, Dimitrios, Kalnis, Panos, Bajic, Vladimir B

Volltext

Inside Cover Image, Volume 6, Issue 2 von Raies, Arwa B., Bajic, Vladimir B.

Volltext

DeepGSR: an optimized deep-learning structure for the recognition of genomic signals and regions von Kalkatawi, Manal, Magana-Mora, Arturo, Jankovic, Boris, Bajic, Vladimir B

Volltext

Effects of cytosine methylation on transcription factor binding sites von Medvedeva, Yulia A, Khamis, Abdullah M, Kulakovskiy, Ivan V, Ba-Alawi, Wail, Bhuyan, Md Shariful I, Kawaji, Hideya, Lassmann, Timo, Harbers, Matthias, Forrest, Alistair R R, Bajic, Vladimir B

Volltext

Marine biofilms constitute a bank of hidden microbial diversity and functional potential von Zhang, Weipeng, Ding, Wei, Li, Yong-Xin, Tam, Chunkit, Bougouffa, Salim, Wang, Ruojun, Pei, Bite, Chiang, Hoyin, Leung, Pokman, Lu, Yanhong, Sun, Jin, Fu, He, Bajic, Vladimir B, Liu, Hongbin, Webster, Nicole S., Qian, Pei-Yuan

Volltext

TcoF-DB v2: update of the database of human and mouse transcription co-factors and transcription factor interactions von Schmeier, Sebastian, Alam, Tanvir, Essack, Magbubah, Bajic, Vladimir B

Volltext

Toward an understanding of the molecular mechanisms of barnacle larval settlement: a comparative transcriptomic approach von Chen, Zhang-Fan, Matsumura, Kiyotaka, Wang, Hao, Arellano, Shawn M, Yan, Xingcheng, Alam, Intikhab, Archer, John A C, Bajic, Vladimir B, Qian, Pei-Yuan

Volltext

LncRNAWiki: harnessing community knowledge in collaborative curation of human long non-coding RNAs von Ma, Lina, Li, Ang, Zou, Dong, Xu, Xingjian, Xia, Lin, Yu, Jun, Bajic, Vladimir B, Zhang, Zhang

Volltext

Comparison Study of Computational Prediction Tools for Drug-Target Binding Affinities von Thafar, Maha, Raies, Arwa Bin, Albaradei, Somayah, Essack, Magbubah, Bajic, Vladimir B

Volltext

OmniGA: Optimized Omnivariate Decision Trees for Generalizable Classification Models von Magana-Mora, Arturo, Bajic, Vladimir B.

Volltext

Promoter analysis reveals globally differential regulation of human long non-coding RNA and protein-coding genes von Alam, Tanvir, Medvedeva, Yulia A, Jia, Hui, Brown, James B, Lipovich, Leonard, Bajic, Vladimir B

Volltext