Human primary liver cancer organoids reveal intratumor and interpatient drug response heterogeneity von Li, Ling, Knutsdottir, Hildur, Hui, Ken, Weiss, Matthew J, He, Jin, Philosophe, Benjamin, Cameron, Andrew M, Wolfgang, Christopher L, Pawlik, Timothy M, Ghiaur, Gabriel, Ewald, Andrew J, Mezey, Esteban, Bader, Joel S, Selaru, Florin M

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A DNA Integrity Network in the Yeast Saccharomyces cerevisiae von Pan, Xuewen, Ye, Ping, Yuan, Daniel S., Wang, Xiaoling, Bader, Joel S., Boeke, Jef D.

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DNA Pooling: a tool for large-scale association studies von Sham, Pak, Bader, Joel S., Craig, Ian, O'Donovan, Michael, Owen, Michael

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Gaining confidence in high-throughput protein interaction networks von Bader, Joel S, Chaudhuri, Amitabha, Rothberg, Jonathan M, Chant, John

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A Protein Interaction Map of Drosophila melanogaster von Giot, L., Bader, J. S., Brouwer, C., Chaudhuri, A., Kuang, B., Li, Y., Hao, Y. L., Ooi, C. E., Godwin, B., Vitols, E., Vijayadamodar, G., Pochart, P., Machineni, H., Welsh, M., Kong, Y., Zerhusen, B., Malcolm, R., Varrone, Z., Collis, A., Minto, M., Burgess, S., McDaniel, L., Stimpson, E., Spriggs, F., Williams, J., Neurath, K., Ioime, N., Agee, M., Voss, E., Furtak, K., Renzulli, R., Aanensen, N., Carrolla, S., Bickelhaupt, E., Lazovatsky, Y., DaSilva, A., Zhong, J., Stanyon, C. A., Finley, R. L., White, K. P., Braverman, M., Jarvie, T., Gold, S., Leach, M., Knight, J., Shimkets, R. A., McKenna, M. P., Chant, J., Rothberg, J. M.

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A Robust Toolkit for Functional Profiling of the Yeast Genome von Pan, Xuewen, Yuan, Daniel S., Xiang, Dong, Wang, Xiaoling, Sookhai-Mahadeo, Sharon, Bader, Joel S., Hieter, Philip, Spencer, Forrest, Boeke, Jef D.

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Analysis of the human protein interactome and comparison with yeast, worm and fly interaction datasets von Gandhi, T K B, Zhong, Jun, Mathivanan, Suresh, Karthick, L, Chandrika, K N, Mohan, S Sujatha, Sharma, Salil, Pinkert, Stefan, Nagaraju, Shilpa, Periaswamy, Balamurugan, Mishra, Goparani, Nandakumar, Kannabiran, Shen, Beiyi, Deshpande, Nandan, Nayak, Rashmi, Sarker, Malabika, Boeke, Jef D, Parmigiani, Giovanni, Schultz, Jörg, Bader, Joel S, Pandey, Akhilesh

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Genome sequencing in microfabricated high-density picolitre reactors von Margulies, Marcel, Egholm, Michael, Altman, William E., Attiya, Said, Bader, Joel S., Bemben, Lisa A., Berka, Jan, Braverman, Michael S., Chen, Yi-Ju, Chen, Zhoutao, Dewell, Scott B., Du, Lei, Fierro, Joseph M., Gomes, Xavier V., Godwin, Brian C., He, Wen, Helgesen, Scott, Ho, Chun He, Irzyk, Gerard P., Jando, Szilveszter C., Alenquer, Maria L. I., Jarvie, Thomas P., Jirage, Kshama B., Kim, Jong-Bum, Knight, James R., Lanza, Janna R., Leamon, John H., Lefkowitz, Steven M., Lei, Ming, Li, Jing, Lohman, Kenton L., Lu, Hong, Makhijani, Vinod B., McDade, Keith E., McKenna, Michael P., Myers, Eugene W., Nickerson, Elizabeth, Nobile, John R., Plant, Ramona, Puc, Bernard P., Ronan, Michael T., Roth, George T., Sarkis, Gary J., Simons, Jan Fredrik, Simpson, John W., Srinivasan, Maithreyan, Tartaro, Karrie R., Tomasz, Alexander, Vogt, Kari A., Volkmer, Greg A., Wang, Shally H., Wang, Yong, Weiner, Michael P., Yu, Pengguang, Begley, Richard F., Rothberg, Jonathan M.

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Technological challenges and milestones for writing genomes von Ostrov, N, Beal, J, Ellis, T, Gordon, DB, Karas, BJ, Lee, HH, Lenaghan, SC, Schloss, JA, Stracquadanio, G, Trefzer, A, Bader, JS, Church, GM, Coelho, CM, Efcavitch, JW, Güell, M, Mitchell, LA, Nielsen, AAK, Peck, B, Smith, AC, Stewart, CN, Tekotte, H

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Global synthetic-lethality analysis and yeast functional profiling von Ooi, Siew Loon, Pan, Xuewen, Peyser, Brian D., Ye, Ping, Meluh, Pamela B., Yuan, Daniel S., Irizarry, Rafael A., Bader, Joel S., Spencer, Forrest A., Boeke, Jef D.

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Greedily building protein networks with confidence von Bader, Joel S

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Quantum and classical relaxation rates from classical simulations von Bader, Joel S., Berne, B. J.

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DNA Transport by a Micromachined Brownian Ratchet Device von Bader, Joel S., Hammond, Richard W., Henck, Steven A., Deem, Michael W., McDermott, Gregory A., Bustillo, James M., Simpson, John W., Mulhern, Gregory T., Rothberg, Jonathan M.

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When Proteomes Collide von Bader, Joel S., Chant, John

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Genetic Interaction Motif Finding by expectation maximization--a novel statistical model for inferring gene modules from synthetic lethality von Qi, Yan, Ye, Ping, Bader, Joel S

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Commensurate distances and similar motifs in genetic congruence and protein interaction networks in yeast von Ye, Ping, Peyser, Brian D, Spencer, Forrest A, Bader, Joel S

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Solvation energies and electronic spectra in polar, polarizable media: Simulation tests of dielectric continuum theory von Bader, Joel S., Berne, B. J.

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Probabilistic inference of molecular networks from noisy data sources von Iossifov, Ivan, Krauthammer, Michael, Friedman, Carol, Hatzivassiloglou, Vasileios, Bader, Joel S., White, Kevin P., Rzhetsky, Andrey

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Role of nuclear tunneling in aqueous ferrous-ferric electron transfer von BADER, J. S, KUHARSKI, R. A, CHANDLER, D

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Computer simulation of photochemically induced electron transfer von Bader, Joel S., Chandler, David

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