Spatial deconvolution of HER2-positive breast cancer delineates tumor-associated cell type interactions von Andersson, Alma, Larsson, Ludvig, Stenbeck, Linnea, Salmén, Fredrik, Ehinger, Anna, Wu, Sunny Z., Al-Eryani, Ghamdan, Roden, Daniel, Swarbrick, Alex, Borg, Åke, Frisén, Jonas, Engblom, Camilla, Lundeberg, Joakim

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High-definition spatial transcriptomics for in situ tissue profiling von Vickovic, Sanja, Eraslan, Gökcen, Salmén, Fredrik, Klughammer, Johanna, Stenbeck, Linnea, Schapiro, Denis, Äijö, Tarmo, Bonneau, Richard, Bergenstråhle, Ludvig, Navarro, José Fernandéz, Gould, Joshua, Griffin, Gabriel K., Borg, Åke, Ronaghi, Mostafa, Frisén, Jonas, Lundeberg, Joakim, Regev, Aviv, Ståhl, Patrik L.

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Visualization and analysis of gene expression in tissue sections by spatial transcriptomics von Ståhl, Patrik L., Salmén, Fredrik, Vickovic, Sanja, Lundmark, Anna, Navarro, José Fernández, Magnusson, Jens, Giacomello, Stefania, Asp, Michaela, Westholm, Jakub O., Huss, Mikael, Mollbrink, Annelie, Linnarsson, Sten, Codeluppi, Simone, Borg, Åke, Pontén, Fredrik, Costea, Paul Igor, Sahlén, Pelin, Mulder, Jan, Bergmann, Olaf, Lundeberg, Joakim, Frisén, Jonas

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GOBO: gene expression-based outcome for breast cancer online von Ringnér, Markus, Fredlund, Erik, Häkkinen, Jari, Borg, Åke, Staaf, Johan

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Refinement of breast cancer molecular classification by miRNA expression profiles von Søkilde, Rolf, Persson, Helena, Ehinger, Anna, Pirona, Anna Chiara, Fernö, Mårten, Hegardt, Cecilia, Larsson, Christer, Loman, Niklas, Malmberg, Martin, Rydén, Lisa, Saal, Lao, Borg, Åke, Vallon-Christerson, Johan, Rovira, Carlos

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HRDetect is a predictor of BRCA1 and BRCA2 deficiency based on mutational signatures von Davies, Helen, Glodzik, Dominik, Morganella, Sandro, Yates, Lucy R, Staaf, Johan, Zou, Xueqing, Ramakrishna, Manasa, Martin, Sancha, Boyault, Sandrine, Sieuwerts, Anieta M, Simpson, Peter T, King, Tari A, Raine, Keiran, Eyfjord, Jorunn E, Kong, Gu, Borg, Åke, Birney, Ewan, Stunnenberg, Hendrik G, van de Vijver, Marc J, Børresen-Dale, Anne-Lise, Martens, John W M, Span, Paul N, Lakhani, Sunil R, Vincent-Salomon, Anne, Sotiriou, Christos, Tutt, Andrew, Thompson, Alastair M, Van Laere, Steven, Richardson, Andrea L, Viari, Alain, Campbell, Peter J, Stratton, Michael R, Nik-Zainal, Serena

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Comprehensive molecular comparison of BRCA1 hypermethylated and BRCA1 mutated triple negative breast cancers von Glodzik, Dominik, Bosch, Ana, Hartman, Johan, Aine, Mattias, Vallon-Christersson, Johan, Reuterswärd, Christel, Karlsson, Anna, Mitra, Shamik, Niméus, Emma, Holm, Karolina, Häkkinen, Jari, Hegardt, Cecilia, Saal, Lao H., Larsson, Christer, Malmberg, Martin, Rydén, Lisa, Ehinger, Anna, Loman, Niklas, Kvist, Anders, Ehrencrona, Hans, Nik-Zainal, Serena, Borg, Åke, Staaf, Johan

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Integrating spatial gene expression and breast tumour morphology via deep learning von He, Bryan, Bergenstråhle, Ludvig, Stenbeck, Linnea, Abid, Abubakar, Andersson, Alma, Borg, Åke, Maaskola, Jonas, Lundeberg, Joakim, Zou, James

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Molecular analyses of triple-negative breast cancer in the young and elderly von Aine, Mattias, Boyaci, Ceren, Hartman, Johan, Häkkinen, Jari, Mitra, Shamik, Campos, Ana Bosch, Nimeus, Emma, Ehinger, Anna, Vallon-Christersson, Johan, Borg, Åke, Staaf, Johan

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Whole-genome sequencing of triple-negative breast cancers in a population-based clinical study von Staaf, Johan, Glodzik, Dominik, Bosch, Ana, Vallon-Christersson, Johan, Reuterswärd, Christel, Häkkinen, Jari, Degasperi, Andrea, Amarante, Tauanne Dias, Saal, Lao H., Hegardt, Cecilia, Stobart, Hilary, Ehinger, Anna, Larsson, Christer, Rydén, Lisa, Loman, Niklas, Malmberg, Martin, Kvist, Anders, Ehrencrona, Hans, Davies, Helen R., Borg, Åke, Nik-Zainal, Serena

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Serial monitoring of circulating tumor DNA in patients with primary breast cancer for detection of occult metastatic disease von Olsson, Eleonor, Winter, Christof, George, Anthony, Chen, Yilun, Howlin, Jillian, Tang, Man‐Hung Eric, Dahlgren, Malin, Schulz, Ralph, Grabau, Dorthe, van Westen, Danielle, Fernö, Mårten, Ingvar, Christian, Rose, Carsten, Bendahl, Pär‐Ola, Rydén, Lisa, Borg, Åke, Gruvberger‐Saal, Sofia K, Jernström, Helena, Saal, Lao H

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Molecular characteristics of breast tumors in patients screened for germline predisposition from a population-based observational study von Nacer, Deborah F, Vallon-Christersson, Johan, Nordborg, Nicklas, Ehrencrona, Hans, Kvist, Anders, Borg, Åke, Staaf, Johan

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Distinct mechanisms of resistance to fulvestrant treatment dictate level of ER independence and selective response to CDK inhibitors in metastatic breast cancer von Kaminska, Kamila, Akrap, Nina, Staaf, Johan, Alves, Carla L, Ehinger, Anna, Ebbesson, Anna, Hedenfalk, Ingrid, Beumers, Lukas, Veerla, Srinivas, Harbst, Katja, Ehmsen, Sidse, Borgquist, Signe, Borg, Åke, Pérez-Fidalgo, Alejandro, Ditzel, Henrik J, Bosch, Ana, Honeth, Gabriella

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The topography of mutational processes in breast cancer genomes von Morganella, Sandro, Alexandrov, Ludmil B., Glodzik, Dominik, Zou, Xueqing, Davies, Helen, Staaf, Johan, Sieuwerts, Anieta M., Brinkman, Arie B., Martin, Sancha, Ramakrishna, Manasa, Butler, Adam, Kim, Hyung-Yong, Borg, Åke, Sotiriou, Christos, Futreal, P. Andrew, Campbell, Peter J., Span, Paul N., Van Laere, Steven, Lakhani, Sunil R., Eyfjord, Jorunn E., Thompson, Alastair M., Stunnenberg, Hendrik G., van de Vijver, Marc J., Martens, John W. M., Børresen-Dale, Anne-Lise, Richardson, Andrea L., Kong, Gu, Thomas, Gilles, Sale, Julian, Rada, Cristina, Stratton, Michael R., Birney, Ewan, Nik-Zainal, Serena

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Multiregion Whole-Exome Sequencing Uncovers the Genetic Evolution and Mutational Heterogeneity of Early-Stage Metastatic Melanoma von Harbst, Katja, Lauss, Martin, Cirenajwis, Helena, Isaksson, Karolin, Rosengren, Frida, Törngren, Therese, Kvist, Anders, Johansson, Maria C, Vallon-Christersson, Johan, Baldetorp, Bo, Borg, Åke, Olsson, Håkan, Ingvar, Christian, Carneiro, Ana, Jönsson, Göran

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Serum selenium, selenoprotein P and glutathione peroxidase 3 as predictors of mortality and recurrence following breast cancer diagnosis: A multicentre cohort study von Demircan, Kamil, Bengtsson, Ylva, Sun, Qian, Brange, Annie, Vallon-Christersson, Johan, Rijntjes, Eddy, Malmberg, Martin, Saal, Lao H., Rydén, Lisa, Borg, Åke, Manjer, Jonas, Schomburg, Lutz

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Matched analysis of circulating selenium with the breast cancer selenotranscriptome: a multicentre prospective study von Demircan, Kamil, Bengtsson, Ylva, Chillon, Thilo Samson, Vallon-Christersson, Johan, Sun, Qian, Larsson, Christer, Malmberg, Martin, Saal, Lao H., Rydén, Lisa, Borg, Åke, Manjer, Jonas, Schomburg, Lutz

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Extended genetic analysis and tumor characteristics in over 4600 women with suspected hereditary breast and ovarian cancer von Öfverholm, Anna, Törngren, Therese, Rosén, Anna, Arver, Brita, Einbeigi, Zakaria, Haraldsson, Karin, Ståhlbom, Anne Kinhult, Kuchinskaya, Ekaterina, Lindblom, Annika, Melin, Beatrice, Paulsson-Karlsson, Ylva, Stenmark-Askmalm, Marie, Tham, Emma, von Wachenfeldt, Anna, Kvist, Anders, Borg, Åke, Ehrencrona, Hans

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Ovarian and Breast Cancer Risks Associated With Pathogenic Variants in RAD51C and RAD51D von Yang, Xin, Song, Honglin, Leslie, Goska, Engel, Christoph, Hahnen, Eric, Auber, Bernd, Horváth, Judit, Kast, Karin, Niederacher, Dieter, Turnbull, Clare, Houlston, Richard, Hanson, Helen, Loveday, Chey, Dolinsky, Jill S, LaDuca, Holly, Ramus, Susan J, Menon, Usha, Rosenthal, Adam N, Jacobs, Ian, Gayther, Simon A, Dicks, Ed, Nevanlinna, Heli, Aittomäki, Kristiina, Pelttari, Liisa M, Ehrencrona, Hans, Borg, Åke, Kvist, Anders, Rivera, Barbara, Hansen, Thomas V O, Djursby, Malene, Lee, Andrew, Dennis, Joe, Bowtell, David D, Traficante, Nadia, Diez, Orland, Balmaña, Judith, Gruber, Stephen B, Chenevix-Trench, Georgia, Investigators, kConFab, Jensen, Allan, Kjær, Susanne K, Høgdall, Estrid, Castéra, Laurent, Garber, Judy, Janavicius, Ramunas, Osorio, Ana, Golmard, Lisa, Vega, Ana, Couch, Fergus J, Robson, Mark, Gronwald, Jacek, Domchek, Susan M, Culver, Julie O, de la Hoya, Miguel, Easton, Douglas F, Foulkes, William D, Tischkowitz, Marc, Meindl, Alfons, Schmutzler, Rita K, Pharoah, Paul D P, Antoniou, Antonis C

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Genome-wide RNAi Screen Identifies Cohesin Genes as Modifiers of Renewal and Differentiation in Human HSCs von Galeev, Roman, Baudet, Aurélie, Kumar, Praveen, Rundberg Nilsson, Alexandra, Nilsson, Björn, Soneji, Shamit, Törngren, Therese, Borg, Åke, Kvist, Anders, Larsson, Jonas

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