A comparison of gene set analysis methods in terms of sensitivity, prioritization and specificity von Tarca, Adi L, Bhatti, Gaurav, Romero, Roberto

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Maternal-fetal immune responses in pregnant women infected with SARS-CoV-2 von Garcia-Flores, Valeria, Romero, Roberto, Xu, Yi, Theis, Kevin R., Arenas-Hernandez, Marcia, Miller, Derek, Peyvandipour, Azam, Bhatti, Gaurav, Galaz, Jose, Gershater, Meyer, Levenson, Dustyn, Pusod, Errile, Tao, Li, Kracht, David, Florova, Violetta, Leng, Yaozhu, Motomura, Kenichiro, Para, Robert, Faucett, Megan, Hsu, Chaur-Dong, Zhang, Gary, Tarca, Adi L., Pique-Regi, Roger, Gomez-Lopez, Nardhy

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Down-weighting overlapping genes improves gene set analysis von Tarca, Adi Laurentiu, Draghici, Sorin, Bhatti, Gaurav, Romero, Roberto

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The amniotic fluid cell-free transcriptome in spontaneous preterm labor von Bhatti, Gaurav, Romero, Roberto, Gomez-Lopez, Nardhy, Pique-Regi, Roger, Pacora, Percy, Jung, Eunjung, Yeo, Lami, Hsu, Chaur-Dong, Kavdia, Mahendra, Tarca, Adi L.

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Compartmentalized profiling of amniotic fluid cytokines in women with preterm labor von Bhatti, Gaurav, Romero, Roberto, Rice, Gregory Edward, Fitzgerald, Wendy, Pacora, Percy, Gomez-Lopez, Nardhy, Kavdia, Mahendra, Tarca, Adi L., Margolis, Leonid

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Integrated Systems Biology Approach Identifies Novel Maternal and Placental Pathways of Preeclampsia von Than, Nandor Gabor, Romero, Roberto, Tarca, Adi Laurentiu, Kekesi, Katalin Adrienna, Xu, Yi, Xu, Zhonghui, Juhasz, Kata, Bhatti, Gaurav, Leavitt, Ron Joshua, Gelencser, Zsolt, Palhalmi, Janos, Chung, Tzu Hung, Gyorffy, Balazs Andras, Orosz, Laszlo, Demeter, Amanda, Szecsi, Anett, Hunyadi-Gulyas, Eva, Darula, Zsuzsanna, Simor, Attila, Eder, Katalin, Szabo, Szilvia, Topping, Vanessa, El-Azzamy, Haidy, LaJeunesse, Christopher, Balogh, Andrea, Szalai, Gabor, Land, Susan, Torok, Olga, Dong, Zhong, Kovalszky, Ilona, Falus, Andras, Meiri, Hamutal, Draghici, Sorin, Hassan, Sonia S, Chaiworapongsa, Tinnakorn, Krispin, Manuel, Knöfler, Martin, Erez, Offer, Burton, Graham J, Kim, Chong Jai, Juhasz, Gabor, Papp, Zoltan

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The amniotic fluid proteome changes with gestational age in normal pregnancy: a cross-sectional study von Bhatti, Gaurav, Romero, Roberto, Gomez-Lopez, Nardhy, Chaiworapongsa, Tinnakorn, Jung, Eunjung, Gotsch, Francesca, Pique-Regi, Roger, Pacora, Percy, Hsu, Chaur-Dong, Kavdia, Mahendra, Tarca, Adi L.

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The Cellular Transcriptome in the Maternal Circulation During Normal Pregnancy: A Longitudinal Study von Gomez-Lopez, Nardhy, Romero, Roberto, Hassan, Sonia S, Bhatti, Gaurav, Berry, Stanley M, Kusanovic, Juan Pedro, Pacora, Percy, Tarca, Adi L

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Distinct Cellular Immune Responses to SARS-CoV-2 in Pregnant Women von Gomez-Lopez, Nardhy, Romero, Roberto, Tao, Li, Gershater, Meyer, Leng, Yaozhu, Zou, Chengrui, Farias-Jofre, Marcelo, Galaz, Jose, Miller, Derek, Tarca, Adi L, Arenas-Hernandez, Marcia, Bhatti, Gaurav, Garcia-Flores, Valeria, Liu, Zhenjie, Para, Robert, Kanninen, Tomi, Hadaya, Ola, Paredes, Carmen, Xu, Yi

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A new customized fetal growth standard for African American women: the PRB/NICHD Detroit study von Tarca, Adi L., Romero, Roberto, Gudicha, Dereje W., Erez, Offer, Hernandez-Andrade, Edgar, Yeo, Lami, Bhatti, Gaurav, Pacora, Percy, Maymon, Eli, Hassan, Sonia S.

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RNA Sequencing Reveals Diverse Functions of Amniotic Fluid Neutrophils and Monocytes/Macrophages in Intra-Amniotic Infection von Gomez-Lopez, Nardhy, Romero, Roberto, Varrey, Aneesha, Leng, Yaozhu, Miller, Derek, Done, Bogdan, Xu, Yi, Bhatti, Gaurav, Motomura, Kenichiro, Gershater, Meyer, Pique-Regi, Roger, Tarca, Adi L.

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The amniotic fluid proteome changes with term labor and informs biomarker discovery in maternal plasma von Bhatti, Gaurav, Romero, Roberto, Gomez-Lopez, Nardhy, Chaiworapongsa, Tinnakorn, Than, Nandor Gabor, Theis, Kevin R., Galaz, Jose, Gotsch, Francesca, Pique-Regi, Roger, Berry, Stanley M., Kavdia, Mahendra, Tarca, Adi L.

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Proteoglycans: Systems-Level Insight into Their Expression in Healthy and Diseased Placentas von Oravecz, Orsolya, Balogh, Andrea, Romero, Roberto, Xu, Yi, Juhasz, Kata, Gelencser, Zsolt, Xu, Zhonghui, Bhatti, Gaurav, Pique-Regi, Roger, Peterfia, Balint, Hupuczi, Petronella, Kovalszky, Ilona, Murthi, Padma, Tarca, Adi L, Papp, Zoltan, Matko, Janos, Than, Nandor Gabor

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The amniotic fluid proteome predicts imminent preterm delivery in asymptomatic women with a short cervix von Gudicha, Dereje W., Romero, Roberto, Gomez-Lopez, Nardhy, Galaz, Jose, Bhatti, Gaurav, Done, Bogdan, Jung, Eunjung, Gallo, Dahiana M., Bosco, Mariachiara, Suksai, Manaphat, Diaz-Primera, Ramiro, Chaemsaithong, Piya, Gotsch, Francesca, Berry, Stanley M., Chaiworapongsa, Tinnakorn, Tarca, Adi L.

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Amniotic fluid cell-free transcriptome: a glimpse into fetal development and placental cellular dynamics during normal pregnancy von Tarca, Adi L., Romero, Roberto, Pique-Regi, Roger, Pacora, Percy, Done, Bogdan, Kacerovsky, Marian, Bhatti, Gaurav, Jaiman, Sunil, Hassan, Sonia S., Hsu, Chaur-Dong, Gomez-Lopez, Nardhy

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Crowdsourcing assessment of maternal blood multi-omics for predicting gestational age and preterm birth von Tarca, Adi L., Pataki, Bálint Ármin, Romero, Roberto, Sirota, Marina, Guan, Yuanfang, Kutum, Rintu, Gomez-Lopez, Nardhy, Done, Bogdan, Bhatti, Gaurav, Yu, Thomas, Andreoletti, Gaia, Chaiworapongsa, Tinnakorn, Hassan, Sonia S., Hsu, Chaur-Dong, Aghaeepour, Nima, Stolovitzky, Gustavo, Csabai, Istvan, Costello, James C.

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Differential immunophenotype of circulating monocytes from pregnant women in response to viral ligands von Farias-Jofre, Marcelo, Romero, Roberto, Xu, Yi, Levenson, Dustyn, Tao, Li, Kanninen, Tomi, Galaz, Jose, Arenas-Hernandez, Marcia, Liu, Zhenjie, Miller, Derek, Bhatti, Gaurav, Seyerle, Megan, Tarca, Adi L, Gomez-Lopez, Nardhy

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A single-cell atlas of the myometrium in human parturition von Pique-Regi, Roger, Romero, Roberto, Garcia-Flores, Valeria, Peyvandipour, Azam, Tarca, Adi L, Pusod, Errile, Galaz, Jose, Miller, Derek, Bhatti, Gaurav, Para, Robert, Kanninen, Tomi, Hadaya, Ola, Paredes, Carmen, Motomura, Kenichiro, Johnson, Jeffrey R, Jung, Eunjung, Hsu, Chaur-Dong, Berry, Stanley M, Gomez-Lopez, Nardhy

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Methylome of Fetal and Maternal Monocytes and Macrophages at the Feto-Maternal Interface von Kim, Sun Young, Romero, Roberto, Tarca, Adi L., Bhatti, Gaurav, Kim, Chong Jai, Lee, JoonHo, Elsey, Amelia, Than, Nandor Gabor, Chaiworapongsa, Tinnakorn, Hassan, Sonia S., Kang, Gyeong Hoon, Kim, Jung-Sun

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Transcriptomics of maternal and fetal membranes can discriminate between gestational-age matched preterm neonates with and without cognitive impairment diagnosed at 18-24 months von Pappas, Athina, Chaiworapongsa, Tinnakorn, Romero, Roberto, Korzeniewski, Steven J, Cortez, Josef C, Bhatti, Gaurav, Gomez-Lopez, Nardhy, Hassan, Sonia S, Shankaran, Seetha, Tarca, Adi L

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