Systematic evaluation of error rates and causes in short samples in next-generation sequencing von Pfeiffer, Franziska, Gröber, Carsten, Blank, Michael, Händler, Kristian, Beyer, Marc, Schultze, Joachim L., Mayer, Günter

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Specification of tissue-resident macrophages during organogenesis von Mass, Elvira, Ballesteros, Ivan, Farlik, Matthias, Halbritter, Florian, Günther, Patrick, Crozet, Lucile, Jacome-Galarza, Christian E, Händler, Kristian, Klughammer, Johanna, Kobayashi, Yasuhiro, Gomez-Perdiguero, Elisa, Schultze, Joachim L, Beyer, Marc, Bock, Christoph, Geissmann, Frederic

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Modulation of Myelopoiesis Progenitors Is an Integral Component of Trained Immunity von Mitroulis, Ioannis, Ruppova, Klara, Wang, Baomei, Chen, Lan-Sun, Grzybek, Michal, Grinenko, Tatyana, Eugster, Anne, Troullinaki, Maria, Palladini, Alessandra, Kourtzelis, Ioannis, Chatzigeorgiou, Antonios, Schlitzer, Andreas, Beyer, Marc, Joosten, Leo A.B., Isermann, Berend, Lesche, Mathias, Petzold, Andreas, Simons, Kai, Henry, Ian, Dahl, Andreas, Schultze, Joachim L., Wielockx, Ben, Zamboni, Nicola, Mirtschink, Peter, Coskun, Ünal, Hajishengallis, George, Netea, Mihai G., Chavakis, Triantafyllos

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Innate immune memory in the brain shapes neurological disease hallmarks von Wendeln, Ann-Christin, Degenhardt, Karoline, Kaurani, Lalit, Gertig, Michael, Ulas, Thomas, Jain, Gaurav, Wagner, Jessica, Häsler, Lisa M., Wild, Katleen, Skodras, Angelos, Blank, Thomas, Staszewski, Ori, Datta, Moumita, Centeno, Tonatiuh Pena, Capece, Vincenzo, Islam, Md. Rezaul, Kerimoglu, Cemil, Staufenbiel, Matthias, Schultze, Joachim L., Beyer, Marc, Prinz, Marco, Jucker, Mathias, Fischer, André, Neher, Jonas J.

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Transcriptome-Based Network Analysis Reveals a Spectrum Model of Human Macrophage Activation von Xue, Jia, Schmidt, Susanne V., Sander, Jil, Draffehn, Astrid, Krebs, Wolfgang, Quester, Inga, De Nardo, Dominic, Gohel, Trupti D., Emde, Martina, Schmidleithner, Lisa, Ganesan, Hariharasudan, Nino-Castro, Andrea, Mallmann, Michael R., Labzin, Larisa, Theis, Heidi, Kraut, Michael, Beyer, Marc, Latz, Eicke, Freeman, Tom C., Ulas, Thomas, Schultze, Joachim L.

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An intrinsic role of IL-33 in Treg cell–mediated tumor immunoevasion von Hatzioannou, Aikaterini, Banos, Aggelos, Sakelaropoulos, Theodore, Fedonidis, Constantinos, Vidali, Maria-Sophia, Köhne, Maren, Händler, Kristian, Boon, Louis, Henriques, Ana, Koliaraki, Vasiliki, Georgiadis, Panagiotis, Zoidakis, Jerome, Termentzi, Aikaterini, Beyer, Marc, Chavakis, Triantafyllos, Boumpas, Dimitrios, Tsirigos, Aristotelis, Verginis, Panayotis

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Implications of regulatory T cells in non-lymphoid tissue physiology and pathophysiology von Malko, Darya, Elmzzahi, Tarek, Beyer, Marc

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Microglial PD‐1 stimulation by astrocytic PD‐L1 suppresses neuroinflammation and Alzheimer’s disease pathology von Kummer, Markus P, Ising, Christina, Kummer, Christiane, Sarlus, Heela, Griep, Angelika, Vieira‐Saecker, Ana, Schwartz, Stephanie, Halle, Annett, Brückner, Matthias, Händler, Kristian, Schultze, Joachim L, Beyer, Marc, Latz, Eicke, Heneka, Michael T

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Lung T cell response in COVID-19 von Shakiba, Mehrnoush Hadaddzadeh, Gemünd, Ioanna, Beyer, Marc, Bonaguro, Lorenzo

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Tackling neurodegeneration in vitro with omics: a path towards new targets and drugs von Carraro, Caterina, Montgomery, Jessica V, Klimmt, Julien, Paquet, Dominik, Schultze, Joachim L, Beyer, Marc D

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Mitochondrial complex I inhibition enhances astrocyte responsiveness to pro-inflammatory stimuli von Wischhof, Lena, Mathew, Amal John, Bonaguro, Lorenzo, Beyer, Marc, Ehninger, Dan, Nicotera, Pierluigi, Bano, Daniele

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Epigenetic orchestration of thymic Treg cell development von Beyer, Marc, Huehn, Jochen

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High-resolution transcriptome of human macrophages von Beyer, Marc, Mallmann, Michael R, Xue, Jia, Staratschek-Jox, Andrea, Vorholt, Daniela, Krebs, Wolfgang, Sommer, Daniel, Sander, Jil, Mertens, Christina, Nino-Castro, Andrea, Schmidt, Susanne V, Schultze, Joachim L

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Interleukin-2 treatment of tumor patients can expand regulatory T cells von Beyer, Marc

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ATF3 Is a Key Regulator of Macrophage IFN Responses von Labzin, Larisa I, Schmidt, Susanne V, Masters, Seth L, Beyer, Marc, Krebs, Wolfgang, Klee, Kathrin, Stahl, Rainer, Lütjohann, Dieter, Schultze, Joachim L, Latz, Eicke, De Nardo, Dominic

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The life-saving benefit of dexamethasone in severe COVID-19 is linked to a reversal of monocyte dysregulation von Knoll, Rainer, Helbig, Elisa T., Dahm, Kilian, Bolaji, Olufemi, Hamm, Frederik, Dietrich, Oliver, van Uelft, Martina, Müller, Sophie, Bonaguro, Lorenzo, Schulte-Schrepping, Jonas, Petrov, Lev, Krämer, Benjamin, Kraut, Michael, Stubbemann, Paula, Thibeault, Charlotte, Brumhard, Sophia, Theis, Heidi, Hack, Gudrun, De Domenico, Elena, Nattermann, Jacob, Becker, Matthias, Beyer, Marc D., Hillus, David, Georg, Philipp, Loers, Constantin, Tiedemann, Janina, Tober-Lau, Pinkus, Lippert, Lena, Millet Pascual-Leone, Belén, Tacke, Frank, Rohde, Gernot, Suttorp, Norbert, Witzenrath, Martin, Saliba, Antoine-Emmanuel, Ulas, Thomas, Polansky, Julia K., Sawitzki, Birgit, Sander, Leif E., Schultze, Joachim L., Aschenbrenner, Anna C., Kurth, Florian

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The transcriptional regulator network of human inflammatory macrophages is defined by open chromatin von Schmidt, Susanne V, Krebs, Wolfgang, Ulas, Thomas, Xue, Jia, Baßler, Kevin, Günther, Patrick, Hardt, Anna-Lena, Schultze, Hartmut, Sander, Jil, Klee, Kathrin, Theis, Heidi, Kraut, Michael, Beyer, Marc, Schultze, Joachim L

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Unique transcriptome signature of mouse microglia von Beutner, Clara, Linnartz-Gerlach, Bettina, Schmidt, Susanne V., Beyer, Marc, Mallmann, Michael R., Staratschek-Jox, Andrea, Schultze, Joachim L., Neumann, Harald

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Differential cell type-specific function of the aryl hydrocarbon receptor and its repressor in diet-induced obesity and fibrosis von Graelmann, Frederike J., Gondorf, Fabian, Majlesain, Yasmin, Niemann, Birte, Klepac, Katarina, Gosejacob, Dominic, Gottschalk, Marlene, Mayer, Michelle, Iriady, Irina, Hatzfeld, Philip, Lindenberg, Sophie K., Wunderling, Klaus, Thiele, Christoph, Abdullah, Zeinab, He, Wei, Hiller, Karsten, Händler, Kristian, Beyer, Marc D., Ulas, Thomas, Pfeifer, Alexander, Esser, Charlotte, Weighardt, Heike, Förster, Irmgard, Reverte-Salisa, Laia

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Systemic alterations in neutrophils and their precursors in early-stage chronic obstructive pulmonary disease von Kapellos, Theodore S., Baßler, Kevin, Fujii, Wataru, Nalkurthi, Christina, Schaar, Anna C., Bonaguro, Lorenzo, Pecht, Tal, Galvao, Izabela, Agrawal, Shobhit, Saglam, Adem, Dudkin, Erica, Frishberg, Amit, de Domenico, Elena, Horne, Arik, Donovan, Chantal, Kim, Richard Y., Gallego-Ortega, David, Gillett, Tessa E., Ansari, Meshal, Schulte-Schrepping, Jonas, Offermann, Nina, Antignano, Ignazio, Sivri, Burcu, Lu, Wenying, Eapen, Mathew S., van Uelft, Martina, Osei-Sarpong, Collins, van den Berge, Maarten, Donker, Hylke C., Groen, Harry J.M., Sohal, Sukhwinder S., Klein, Johanna, Schreiber, Tina, Feißt, Andreas, Yildirim, Ali Önder, Schiller, Herbert B., Nawijn, Martijn C., Becker, Matthias, Händler, Kristian, Beyer, Marc, Capasso, Melania, Ulas, Thomas, Hasenauer, Jan, Pizarro, Carmen, Theis, Fabian J., Hansbro, Philip M., Skowasch, Dirk, Schultze, Joachim L.

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