Transcriptional patterns in both host and bacterium underlie a daily rhythm of anatomical and metabolic change in a beneficial symbiosis von Wier, Andrew M, Nyholm, Spencer V, Mandel, Mark J, Massengo-Tiassé, R. Prisca, Schaefer, Amy L, Koroleva, Irina, Splinter-BonDurant, Sandra, Brown, Bartley, Manzella, Liliana, Snir, Einat, Almabrazi, Hakeem, Scheetz, Todd E, Bonaldo, Maria de Fatima, Casavant, Thomas L, Soares, M. Bento, Cronan, John E, Reed, Jennifer L, Ruby, Edward G, McFall-Ngai, Margaret J

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Annotated expressed sequence tags and cDNA microarrays for studies of brain and behavior in the honey bee von Whitfield, Charles W, Band, Mark R, Bonaldo, Maria F, Kumar, Charu G, Liu, Lei, Pardinas, Jose R, Robertson, Hugh M, Soares, M Bento, Robinson, Gene E

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Effects of colonization, luminescence, and autoinducer on host transcription during development of the squid-vibrio association von Chun, Carlene K, Troll, Joshua V, Koroleva, Irina, Brown, Bartley, Manzella, Liliana, Snir, Einat, Almabrazi, Hakeem, Scheetz, Todd E, de Fatima Bonaldo, Maria, Casavant, Thomas L, Soares, M. Bento, Ruby, Edward G, McFall-Ngai, Margaret J

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Migration of the Plastid Genome to the Nucleus in a Peridinin Dinoflagellate von Hackett, Jeremiah D., Yoon, Hwan Su, Soares, M. Bento, Bonaldo, Maria F., Casavant, Thomas L., Scheetz, Todd E., Nosenko, Tetyana, Bhattacharya, Debashish

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Analysis of ESTs from Lutzomyia longipalpis sand flies and their contribution toward understanding the insect–parasite relationship von Dillon, Rod J., Ivens, Al C., Churcher, Carol, Holroyd, Nancy, Quail, Michael A., Rogers, Matthew E., Soares, M. Bento, Bonaldo, Maria F., Casavant, Thomas L., Lehane, Mike J., Bates, Paul A.

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Saci-1, -2, and -3 and Perere, Four Novel Retrotransposons with High Transcriptional Activities from the Human Parasite Schistosoma mansoni von DEMARCO, Ricardo, KOWALTOWSKI, Andre T, SETUBAL, Joao C, DIAS-NETO, Emmanuel, LEITE, Luciana C. C, VERJOVSKI-ALMEIDA, Sergio, MACHADO, Abimael A, SOARES, M. Bento, GARGIONI, Cybele, KAWANO, Toshie, RODRIGUES, Vanderlei, MADEIRA, Alda M. B. N, WILSON, R. Alan, MENCK, Carlos F. M

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An annotated cDNA library of juvenile Euprymna scolopes with and without colonization by the symbiont Vibrio fischeri von Chun, Carlene K, Scheetz, Todd E, Bonaldo, Maria de Fatima, Brown, Bartley, Clemens, Anik, Crookes-Goodson, Wendy J, Crouch, Keith, DeMartini, Tad, Eyestone, Mari, Goodson, Michael S, Janssens, Bernadette, Kimbell, Jennifer L, Koropatnick, Tanya A, Kucaba, Tamara, Smith, Christina, Stewart, Jennifer J, Tong, Deyan, Troll, Joshua V, Webster, Sarahrose, Winhall-Rice, Jane, Yap, Cory, Casavant, Thomas L, McFall-Ngai, Margaret J, Soares, M Bento

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Transcriptome analysis of the acoelomate human parasite Schistosoma mansoni von Bonaldo, Maria F, Farias, Leonardo P, Setubal, João C, Leite, Ricardo A, Rodrigues, Vanderlei, Nishiyama, Milton Y, Ho, Paulo L, Coulson, Patricia S, Dillon, Gary P, Soares, M Bento, Reis, Eduardo M, Paquola, Apuã C M, Ashton, Peter D, Nascimento, Ana L T O, Marques, Regina C P, Wilson, R Alan, Verjovski-Almeida, Sergio, Miyasato, Patricia A, Ojopi, Elida P B, Ribeiro, Marcela A, DeMarco, Ricardo, Madeira, Alda M B N, Piazza, João P, Sá, Renata G, Martins, Elizabeth A L, Gregorio, Sheila P, Leite, Luciana C C, Kawano, Toshie, Stukart, Gaëlle C, Kitajima, João P, Malaquias, L Cosme C, Adamson, Rachel E, Guimarães, Pedro E M, Gargioni, Cybele, Ohlweiler, Fernanda P, Menck, Carlos F M, Dias-Neto, Emmanuel

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Identifying Components of the NF-κB Pathway in the Beneficial Euprymna scolopes-Vibrio fischeri Light Organ Symbiosis von GOODSON, Michael S, KOJADINOVIC, Mila, TROLL, Joshua V, SCHEETZ, Todd E, CASAVANT, Thomas L, SOARES, M. Bento, MCFALL-NGAI, Margaret J

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EST-based gene discovery in pig: virtual expression patterns and comparative mapping to human von Tuggle, Christopher K, Green, Jon A, Fitzsimmons, Carolyn, Woods, Rami, Prather, Randall S, Malchenko, Sergei, Soares, Bento M, Kucaba, Tamara, Crouch, Keith, Smith, Christina, Tack, Dylan, Robinson, Natalie, O'Leary, Brian, Scheetz, Todd, Casavant, Thomas, Pomp, Daniel, Edeal, Brad J, Zhang, Yuandan, Rothschild, Max F, Garwood, Kevin, Beavis, William

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High-density rat radiation hybrid maps containing over 24,000 SSLPs, genes, and ESTs provide a direct link to the rat genome sequence von Kwitek, Anne E, Gullings-Handley, Jo, Yu, Jiaming, Carlos, Danilo C, Orlebeke, Kimberly, Nie, Jeff, Eckert, Jeffrey, Lemke, Angela, Andrae, Jaime Wendt, Bromberg, Susan, Pasko, Dean, Chen, Dan, Scheetz, Todd E, Casavant, Thomas L, Soares, M Bento, Sheffield, Val C, Tonellato, Peter J, Jacob, Howard J

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Differential expression of genes within the cochlea as defined by a custom mouse inner ear microarray von Morris, Ken A, Snir, Einat, Pompeia, Celine, Koroleva, Irina V, Kachar, Bechara, Hayashizaki, Yoshihide, Carninci, Piero, Soares, M Bento, Beisel, Kirk W

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Comprehensive in silico functional specification of mouse retina transcripts von Zhang, Samuel Shao-Min, Xu, Xuming, Li, Jinming, Liu, Mu-Gen, Zhao, Hongyu, Soares, M Bento, Barnstable, Colin J, Fu, Xin-Yuan

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Generation and analysis of 280,000 human expressed sequence tags von Hillier, L D, Lennon, G, Becker, M, Bonaldo, M F, Chiapelli, B, Chissoe, S, Dietrich, N, DuBuque, T, Favello, A, Gish, W, Hawkins, M, Hultman, M, Kucaba, T, Lacy, M, Le, M, Le, N, Mardis, E, Moore, B, Morris, M, Parsons, J, Prange, C, Rifkin, L, Rohlfing, T, Schellenberg, K, Bento Soares, M, Tan, F, Thierry-Meg, J, Trevaskis, E, Underwood, K, Wohldman, P, Waterston, R, Wilson, R, Marra, M

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PLET1 ( C11orf34), a highly expressed and processed novel gene in pig and mouse placenta, is transcribed but poorly spliced in human von Zhao, Shu-Hong, Simmons, David G., Cross, James C., Scheetz, Todd E., Casavant, Thomas L., Soares, M.Bento, Tuggle, Christopher K.

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Automated construction of high-density comparative maps between rat, human, and mouse von Kwitek, A E, Tonellato, P J, Chen, D, Gullings-Handley, J, Cheng, Y S, Twigger, S, Scheetz, T E, Casavant, T L, Stoll, M, Nobrega, M A, Shiozawa, M, Soares, M B, Sheffield, V C, Jacob, H J

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Large-scale gene discovery in human airway epithelia reveals novel transcripts von Scheetz, Todd E, Zabner, Joseph, Welsh, Michael J, Coco, Justin, Eyestone, Mari, de Fatima Bonaldo, Maria, Kucaba, Tamara, Casavant, Thomas L, Soares, M. Bento, McCray, Paul B., Jr

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Rapid cDNA sequencing (expressed sequence tags) from a directionally cloned human infant brain cDNA library von Adams, Mark D, Soares, M. Bento, Kerlavage, Anthony R, Fields, Chris, Venter, J. Craig

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A comprehensive nonredundant expressed sequence tag collection for the developing Rattus norvegicus heart von Laffin, Jennifer J.S, Scheetz, Todd E, de Fatima Bonaldo, Maria, Reiter, Rebecca S, Chang, Shereen, Eyestone, Mari, Abdulkawy, Hakeem, Brown, Bartley, Roberts, Chad, Tack, Dylan, Kucaba, Tamara, Lin, Jim Jung-Ching, Sheffield, Val C, Casavant, Thomas L, Soares, M. Bento

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The neuronal ceroid lipofuscinoses in human EPMR and mnd mutant mice are associated with mutations in CLN8 von Ranta, Susanna, Zhang, Yonghui, Ross, Barbara, Lonka, Liina, Takkunen, Elina, Messer, Anne, Sharp, Julie, Wheeler, Ruth, Kusumi, Kenro, Mole, Sara, Liu, Wencheng, Soares, Marcelo Bento, de Fatima Bonaldo, Maria, Hirvasniemi, Aune, Chapelle, Albert de la, Gilliam, T. Conrad, Lehesjoki, Anna-Elina

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