Characterization of an electron conduit between bacteria and the extracellular environment von Hartshorne, Robert S, Reardon, Catherine L, Ross, Daniel, Nuester, Jochen, Clarke, Thomas A, Gates, Andrew J, Mills, Paul C, Fredrickson, Jim K, Zachara, John M, Shi, Liang, Beliaev, Alex S, Marshall, Matthew J, Tien, Ming, Brantley, Susan, Butt, Julea N, Richardson, David J

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MtrC, an outer membrane decahaem c cytochrome required for metal reduction in Shewanella putrefaciens MR‐1 von Beliaev, Alex S., Saffarini, Daad A., McLaughlin, Jennifer L., Hunnicutt, David

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Transcriptome Dynamics of Deinococcus radiodurans Recovering from Ionizing Radiation von Liu, Yongqing, Zhou, Jizhong, Omelchenko, Marina V., Beliaev, Alex S., Venkateswaran, Amudhan, Stair, Julia, Wu, Liyou, Thompson, Dorothea K., Xu, Dong, Rogozin, Igor B., Gaidamakova, Elena K., Zhai, Min, Makarova, Kira S., Koonin, Eugene V., Daly, Michael J.

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A flexible microbial co-culture platform for simultaneous utilization of methane and carbon dioxide from gas feedstocks von Hill, Eric A., Chrisler, William B., Beliaev, Alex S., Bernstein, Hans C.

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Metabolomics and microarrays for improved understanding of phenotypic characteristics controlled by both genomics and environmental constraints von Phelps, Tommy J, Palumbo, Anthony V, Beliaev, Alex S

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Microarray Transcription Profiling of a Shewanella oneidensis etrA Mutant von Beliaev, Alex S, Thompson, Dorothea K, Fields, Matthew W, Wu, Liyou, Lies, Douglas P, Nealson, Kenneth H, Zhou, Jizhong

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role of 4-hydroxyphenylpyruvate dioxygenase in enhancement of solid-phase electron transfer by Shewanella oneidensis MR-1 von Turick, Charles E, Beliaev, Alex S, Zakrajsek, Brian A, Reardon, Catherine L, Lowy, Daniel A, Poppy, Tara E, Maloney, Andrea, Ekechukwu, Amy A

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Structure of a bacterial cell surface decaheme electron conduit von Clarke, Thomas A, Edwards, Marcus J, Gates, Andrew J, Hall, Andrea, White, Gaye F, Bradley, Justin, Reardon, Catherine L, Shi, Liang, Beliaev, Alexander S, Marshall, Matthew J, Wang, Zheming, Watmough, Nicholas J, Fredrickson, James K, Zachara, John M, Butt, Julea N, Richardson, David J

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Engineering Limonene and Bisabolene Production in Wild Type and a Glycogen-Deficient Mutant of Synechococcus sp. PCC 7002 von Davies, Fiona K, Work, Victoria H, Beliaev, Alexander S, Posewitz, Matthew C

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Mathematical Modeling of Microbial Community Dynamics: A Methodological Review von Song, Hyun-Seob, Cannon, William R, Beliaev, Alexander S, Konopka, Allan

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Current Production and Metal Oxide Reduction by Shewanella oneidensis MR-1 Wild Type and Mutants von Bretschger, Orianna, Obraztsova, Anna, Sturm, Carter A, Chang, In Seop, Gorby, Yuri A, Reed, Samantha B, Culley, David E, Reardon, Catherine L, Barua, Soumitra, Romine, Margaret F, Zhou, Jizhong, Beliaev, Alexander S, Bouhenni, Rachida, Saffarini, Daad, Mansfeld, Florian, Kim, Byung-Hong, Fredrickson, James K, Nealson, Kenneth H

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Pyruvate and Lactate Metabolism by Shewanella oneidensis MR-1 under Fermentation, Oxygen Limitation, and Fumarate Respiration Conditions von PINCHUK, Grigoriy E, GEYDEBREKHT, Oleg V, HILL, Eric A, REED, Jennifer L, KONOPKA, Allan E, BELIAEV, Alexander S, FREDRICKSON, Jim K

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Inference of interactions in cyanobacterial–heterotrophic co-cultures via transcriptome sequencing von Beliaev, Alexander S, Romine, Margie F, Serres, Margrethe, Bernstein, Hans C, Linggi, Bryan E, Markillie, Lye M, Isern, Nancy G, Chrisler, William B, Kucek, Leo A, Hill, Eric A, Pinchuk, Grigoriy E, Bryant, Donald A, Steven Wiley, H, Fredrickson, Jim K, Konopka, Allan

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Gene and Protein Expression Profiles of Shewanella oneidensis during Anaerobic Growth with Different Electron Acceptors von Beliaev, Alex S., Thompson, Dorothea K., Khare, Tripti, Lim, Hanjo, Brandt, Craig C., Li, Guangshan, Murray, Alison E., Heidelberg, John F., Giometti, Carol S., Yates, John, Nealson, Kenneth H., Tiedje, James M., Zhou, Jizhong

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Genomic reconstruction of Shewanella oneidensis MR-1 metabolism reveals a previously uncharacterized machinery for lactate utilization von Pinchuk, Grigory E, Rodionov, Dmitry A, Yang, Chen, Li, Xiaoqing, Osterman, Andrei L, Dervyn, Etienne, Geydebrekht, Oleg V, Reed, Samantha B, Romine, Margaret F, Collart, Frank R, Scott, James H, Fredrickson, Jim K, Beliaev, Alexander S

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c-Type cytochrome-dependent formation of U(IV) nanoparticles by Shewanella oneidensis von Marshall, Matthew J, Beliaev, Alexander S, Dohnalkova, Alice C, Kennedy, David W, Shi, Liang, Wang, Zheming, Boyanov, Maxim I, Lai, Barry, Kemner, Kenneth M, McLean, Jeffrey S, Reed, Samantha B, Culley, David E, Bailey, Vanessa L, Simonson, Cody J, Saffarini, Daad A, Romine, Margaret F, Zachara, John M, Fredrickson, James K

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Genome-scale modeling of light-driven reductant partitioning and carbon fluxes in diazotrophic unicellular cyanobacterium Cyanothece sp. ATCC 51142 von Vu, Trang T, Stolyar, Sergey M, Pinchuk, Grigoriy E, Hill, Eric A, Kucek, Leo A, Brown, Roslyn N, Lipton, Mary S, Osterman, Andrei, Fredrickson, Jim K, Konopka, Allan E, Beliaev, Alexander S, Reed, Jennifer L

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Constraint-based model of Shewanella oneidensis MR-1 metabolism: a tool for data analysis and hypothesis generation von Pinchuk, Grigoriy E, Hill, Eric A, Geydebrekht, Oleg V, De Ingeniis, Jessica, Zhang, Xiaolin, Osterman, Andrei, Scott, James H, Reed, Samantha B, Romine, Margaret F, Konopka, Allan E, Beliaev, Alexander S, Fredrickson, Jim K, Reed, Jennifer L

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Global Transcriptome Analysis of Shewanella oneidensis MR-1 Exposed to Different Terminal Electron Acceptors von BELIAEV, A. S, KLINGEMAN, D. M, KLAPPENBACH, J. A, WU, L, ROMINE, M. F, TIEDJE, J. M, NEALSON, K. H, FREDRICKSON, J. K, ZHOU, J

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Isolation of a High-Affinity Functional Protein Complex between OmcA and MtrC: Two Outer Membrane Decaheme c-Type Cytochromes of Shewanella oneidensis MR-1 von Shi, Liang, Chen, Baowei, Wang, Zheming, Elias, Dwayne A, Mayer, M Uljana, Gorby, Yuri A, Ni, Shuison, Lower, Brian H, Kennedy, David W, Wunschel, David S, Mottaz, Heather M, Marshall, Matthew J, Hill, Eric A, Beliaev, Alexander S, Zachara, John M, Fredrickson, James K, Squier, Thomas C

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