Systematic reanalysis of clinical exome data yields additional diagnoses: implications for providers von Wenger, Aaron M., Guturu, Harendra, Bernstein, Jonathan A., Bejerano, Gill

Volltext

M-CAP eliminates a majority of variants of uncertain significance in clinical exomes at high sensitivity von Jagadeesh, Karthik A, Wenger, Aaron M, Berger, Mark J, Guturu, Harendra, Stenson, Peter D, Cooper, David N, Bernstein, Jonathan A, Bejerano, Gill

Volltext

WhichTF is functionally important in your open chromatin data? von Tanigawa, Yosuke, Dyer, Ethan S, Bejerano, Gill

Volltext

Thousands of human mobile element fragments undergo strong purifying selection near developmental genes von Lowe, Craig B, Bejerano, Gill, Haussler, David

Volltext

Changes in the enhancer landscape during early placental development uncover a trophoblast invasion gene-enhancer network von Tuteja, Geetu, Chung, Tisha, Bejerano, Gill

Volltext

InpherNet accelerates monogenic disease diagnosis using patients’ candidate genes’ neighbors von Yoo, Boyoung, Birgmeier, Johannes, Bernstein, Jonathan A., Bejerano, Gill

Volltext

Human-specific loss of regulatory DNA and the evolution of human-specific traits von Bejerano, Gill, Kingsley, David M, McLean, Cory Y, Reno, Philip L, Pollen, Alex A, Bassan, Abraham I, Capellini, Terence D, Guenther, Catherine, Indjeian, Vahan B, Lim, Xinhong, Menke, Douglas B, Schaar, Bruce T, Wenger, Aaron M

Volltext

Components of genetic associations across 2,138 phenotypes in the UK Biobank highlight adipocyte biology von Tanigawa, Yosuke, Li, Jiehan, Justesen, Johanne M., Horn, Heiko, Aguirre, Matthew, DeBoever, Christopher, Chang, Chris, Narasimhan, Balasubramanian, Lage, Kasper, Hastie, Trevor, Park, Chong Y., Bejerano, Gill, Ingelsson, Erik, Rivas, Manuel A.

Volltext

Ultraconserved Elements in the Human Genome von Bejerano, Gill, Pheasant, Michael, Makunin, Igor, Stephen, Stuart, Kent, W. James, Mattick, John S., Haussler, David

Volltext

MicroRNA-9 Couples Brain Neurogenesis and Angiogenesis von Madelaine, Romain, Sloan, Steven A., Huber, Nina, Notwell, James H., Leung, Louis C., Skariah, Gemini, Halluin, Caroline, Paşca, Sergiu P., Bejerano, Gill, Krasnow, Mark A., Barres, Ben A., Mourrain, Philippe

Volltext

The Effect of Population Structure on Murine Genome-Wide Association Studies von Wang, Meiyue, Fang, Zhuoqing, Yoo, Boyoung, Bejerano, Gill, Peltz, Gary

Volltext

Microbiota modulate transcription in the intestinal epithelium without remodeling the accessible chromatin landscape von Camp, J Gray, Frank, Christopher L, Lickwar, Colin R, Guturu, Harendra, Rube, Tomas, Wenger, Aaron M, Chen, Jenny, Bejerano, Gill, Crawford, Gregory E, Rawls, John F

Volltext

Evolutionarily conserved elements in vertebrate, insect, worm, and yeast genomes von Siepel, Adam, Bejerano, Gill, Pedersen, Jakob S, Hinrichs, Angie S, Hou, Minmei, Rosenbloom, Kate, Clawson, Hiram, Spieth, John, Hillier, Ladeana W, Richards, Stephen, Weinstock, George M, Wilson, Richard K, Gibbs, Richard A, Kent, W James, Miller, Webb, Haussler, David

Volltext

A screen for deeply conserved non-coding GWAS SNPs uncovers a MIR-9-2 functional mutation associated to retinal vasculature defects in human von Madelaine, Romain, Notwell, James H, Skariah, Gemini, Halluin, Caroline, Chen, Charles C, Bejerano, Gill, Mourrain, Philippe

Volltext

Analysis of structural variation among inbred mouse strains von Arslan, Ahmed, Fang, Zhuoqing, Wang, Meiyue, Tan, Yalun, Cheng, Zhuanfen, Chen, Xinyu, Guan, Yuan, J Pisani, Laura, Yoo, Boyoung, Bejerano, Gill, Peltz, Gary

Volltext

Coding exons function as tissue-specific enhancers of nearby genes von Birnbaum, Ramon Y, Clowney, E Josephine, Agamy, Orly, Kim, Mee J, Zhao, Jingjing, Yamanaka, Takayuki, Pappalardo, Zachary, Clarke, Shoa L, Wenger, Aaron M, Nguyen, Loan, Gurrieri, Fiorella, Everman, David B, Schwartz, Charles E, Birk, Ohad S, Bejerano, Gill, Lomvardas, Stavros, Ahituv, Nadav

Volltext

X-CAP improves pathogenicity prediction of stopgain variants von Rastogi, Ruchir, Stenson, Peter D, Cooper, David N, Bejerano, Gill

Volltext

Mx1 and Mx2 key antiviral proteins are surprisingly lost in toothed whales von Braun, Benjamin A, Amir Marcovitz, J. Gray Camp, Robin Jia, Gill Bejerano

Volltext

TBR1 regulates autism risk genes in the developing neocortex von Notwell, James H, Heavner, Whitney E, Darbandi, Siavash Fazel, Katzman, Sol, McKenna, William L, Ortiz-Londono, Christian F, Tastad, David, Eckler, Matthew J, Rubenstein, John L R, McConnell, Susan K, Chen, Bin, Bejerano, Gill

Volltext

Identification and classification of conserved RNA secondary structures in the human genome von Pedersen, Jakob Skou, Bejerano, Gill, Siepel, Adam, Rosenbloom, Kate, Lindblad-Toh, Kerstin, Lander, Eric S, Kent, Jim, Miller, Webb, Haussler, David

Volltext