Bacterial diversity at different stages of the composting process von Partanen, Pasi, Hultman, Jenni, Paulin, Lars, Auvinen, Petri, Romantschuk, Martin

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Gut microbiota are related to Parkinson's disease and clinical phenotype von Scheperjans, Filip, Aho, Velma, Pereira, Pedro A. B., Koskinen, Kaisa, Paulin, Lars, Pekkonen, Eero, Haapaniemi, Elena, Kaakkola, Seppo, Eerola-Rautio, Johanna, Pohja, Marjatta, Kinnunen, Esko, Murros, Kari, Auvinen, Petri

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Relationships of gut microbiota, short-chain fatty acids, inflammation, and the gut barrier in Parkinson's disease von Aho, Velma T. E., Houser, Madelyn C., Pereira, Pedro A. B., Chang, Jianjun, Rudi, Knut, Paulin, Lars, Hertzberg, Vicki, Auvinen, Petri, Tansey, Malu G., Scheperjans, Filip

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Environmental biodiversity, human microbiota, and allergy are interrelated von Hanski, Ilkka, von Hertzen, Leena, Fyhrquist, Nanna, Koskinen, Kaisa, Torppa, Kaisa, Laatikainen, Tiina, Karisola, Piia, Auvinen, Petri, Paulin, Lars, Mäkelä, Mika J, Vartiainen, Erkki, Kosunen, Timo U, Alenius, Harri, Haahtela, Tari

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Gut microbiota in Parkinson's disease: Temporal stability and relations to disease progression von Aho, Velma T.E., Pereira, Pedro A.B., Voutilainen, Sari, Paulin, Lars, Pekkonen, Eero, Auvinen, Petri, Scheperjans, Filip

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Bile microbiota in primary sclerosing cholangitis: Impact on disease progression and development of biliary dysplasia von Pereira, Pedro, Aho, Velma, Arola, Johanna, Boyd, Sonja, Jokelainen, Kalle, Paulin, Lars, Auvinen, Petri, Färkkilä, Martti

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Metagenomic and metatranscriptomic analysis of the microbial community in Swiss-type Maasdam cheese during ripening von Duru, Ilhan Cem, Laine, Pia, Andreevskaya, Margarita, Paulin, Lars, Kananen, Soila, Tynkkynen, Soile, Auvinen, Petri, Smolander, Olli-Pekka

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Lep-MAP: fast and accurate linkage map construction for large SNP datasets von Rastas, Pasi, Paulin, Lars, Hanski, Ilkka, Lehtonen, Rainer, Auvinen, Petri

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Cytokinin and Auxin Display Distinct but Interconnected Distribution and Signaling Profiles to Stimulate Cambial Activity von Immanen, Juha, Nieminen, Kaisa, Smolander, Olli-Pekka, Kojima, Mikiko, Alonso Serra, Juan, Koskinen, Patrik, Zhang, Jing, Elo, Annakaisa, Mähönen, Ari Pekka, Street, Nathaniel, Bhalerao, Rishikesh P., Paulin, Lars, Auvinen, Petri, Sakakibara, Hitoshi, Helariutta, Ykä

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Oral and nasal microbiota in Parkinson's disease von Pereira, Pedro A.B., MSc, Aho, Velma T.E., MSc, BA, Paulin, Lars, MSc, Pekkonen, Eero, MD, PhD, Auvinen, Petri, PhD, Scheperjans, Filip, MD, PhD

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BARCOSEL: a tool for selecting an optimal barcode set for high-throughput sequencing von Somervuo, Panu, Koskinen, Patrik, Mei, Peng, Holm, Liisa, Auvinen, Petri, Paulin, Lars

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Transcriptome analysis unravels the biocontrol mechanism of Serratia plymuthica A30 against potato soft rot caused by Dickeya solani von Hadizadeh, Iman, Peivastegan, Bahram, Nielsen, Kåre Lehmann, Auvinen, Petri, Sipari, Nina, Pirhonen, Minna

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A transcriptomic view to wounding response in young Scots pine stems von Lim, Kean-Jin, Paasela, Tanja, Harju, Anni, Venäläinen, Martti, Paulin, Lars, Auvinen, Petri, Kärkkäinen, Katri, Teeri, Teemu H.

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Transcriptomic time-series analysis of cold- and heat-shock response in psychrotrophic lactic acid bacteria von Duru, Ilhan Cem, Ylinen, Anne, Belanov, Sergei, Pulido, Alan Avila, Paulin, Lars, Auvinen, Petri

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Dual-light photodynamic therapy administered daily provides a sustained antibacterial effect on biofilm and prevents Streptococcus mutans adaptation von Nikinmaa, Sakari, Alapulli, Heikki, Auvinen, Petri, Vaara, Martti, Rantala, Juha, Kankuri, Esko, Sorsa, Timo, Meurman, Jukka, Patila, Tommi

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Pangenome and genomic taxonomy analyses of Leuconostoc gelidum and Leuconostoc gasicomitatum von Johansson, Per, Säde, Elina, Hultman, Jenni, Auvinen, Petri, Björkroth, Johanna

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Genome-scale study reveals reduced metabolic adaptability in patients with non-alcoholic fatty liver disease von Hyötyläinen, Tuulia, Jerby, Livnat, Petäjä, Elina M., Mattila, Ismo, Jäntti, Sirkku, Auvinen, Petri, Gastaldelli, Amalia, Yki-Järvinen, Hannele, Ruppin, Eytan, Orešič, Matej

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Archetype JC Polyomavirus (JCPyV) Prevails in a Rare Case of JCPyV Nephropathy and in Stable Renal Transplant Recipients With JCPyV Viruria von Seppälä, Hanna M., Helanterä, Ilkka T., Laine, Pia K. S., Lautenschlager, Irmeli T., Paulín, Lars G., Jahnukainen, Timo J., Auvinen, Petri O. V., Auvinen, Eeva

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Human papillomavirus 16 E5 modulates the expression of host microRNAs von Greco, Dario, Kivi, Niina, Qian, Kui, Leivonen, Suvi-Katri, Auvinen, Petri, Auvinen, Eeva

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Taxonomically and functionally diverse microbial communities in deep crystalline rocks of the Fennoscandian shield von Nyyssönen, Mari, Hultman, Jenni, Ahonen, Lasse, Kukkonen, Ilmo, Paulin, Lars, Laine, Pia, Itävaara, Merja, Auvinen, Petri

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