Clinical evaluation of a low-coverage whole-genome test for detecting homologous recombination deficiency in ovarian cancer von Boidot, Romain, Blum, Michael G.B., Wissler, Marie-Pierre, Gottin, Céline, Ruzicka, Jiri, Chevrier, Sandy, Delhomme, Tiffany M., Audoux, Jérome, Jeanniard, Adrien, Just, Pierre-Alexandre, Harter, Philipp, Pignata, Sandro, González-Martin, Antonio, Marth, Christian, Mäenpää, Johanna, Colombo, Nicoletta, Vergote, Ignace, Fujiwara, Keiichi, Duforet-Frebourg, Nicolas, Bertrand, Denis, Philippe, Nicolas, Ray-Coquard, Isabelle, Pujade-Lauraine, Eric

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DE-kupl: exhaustive capture of biological variation in RNA-seq data through k-mer decomposition von Audoux, Jérôme, Philippe, Nicolas, Chikhi, Rayan, Salson, Mikaël, Gallopin, Mélina, Gabriel, Marc, Le Coz, Jérémy, Drouineau, Emilie, Commes, Thérèse, Gautheret, Daniel

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New insights into diagnosis and therapeutic options for proliferative hepatoblastoma von Hooks, Katarzyna B., Audoux, Jérôme, Fazli, Helena, Lesjean, Sarah, Ernault, Tony, Dugot‐Senant, Nathalie, Leste‐Lasserre, Thierry, Hagedorn, Martin, Rousseau, Benoit, Danet, Coralie, Branchereau, Sophie, Brugières, Laurence, Taque, Sophie, Guettier, Catherine, Fabre, Monique, Rullier, Anne, Buendia, Marie‐Annick, Commes, Thérèse, Grosset, Christophe F., Raymond, Anne‐Aurélie

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SimBA: A methodology and tools for evaluating the performance of RNA-Seq bioinformatic pipelines von Audoux, Jérôme, Salson, Mikaël, Grosset, Christophe F, Beaumeunier, Sacha, Holder, Jean-Marc, Commes, Thérèse, Philippe, Nicolas

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U6 snRNA Pseudogenes: Markers of Retrotransposition Dynamics in Mammals von Doucet, Aurélien J, Droc, Gaëtan, Siol, Oliver, Audoux, Jérôme, Gilbert, Nicolas

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RNA-Seq Analysis to Detect Abnormal Fusion Transcripts Linked to Chromothripsis von Bougé, Anne-Laure, Rufflé, Florence, Riquier, Sébastien, Guibert, Benoit, Audoux, Jérôme, Commes, Thérèse

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Kmerator Suite: design of specific k-mer signatures and automatic metadata discovery in large RNA-seq datasets von Riquier, Sébastien, Bessiere, Chloé, Guibert, Benoit, Bouge, Anne-Laure, Boureux, Anthony, Ruffle, Florence, Audoux, Jérôme, Gilbert, Nicolas, Xue, Haoliang, Gautheret, Daniel, Commes, Thérèse

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New chimeric RNAs in acute myeloid leukemia [version 2; peer review: 2 approved] von Rufflé, Florence, Audoux, Jerome, Boureux, Anthony, Beaumeunier, Sacha, Gaillard, Jean-Baptiste, Bou Samra, Elias, Megarbane, Andre, Cassinat, Bruno, Chomienne, Christine, Alves, Ronnie, Riquier, Sebastien, Gilbert, Nicolas, Lemaitre, Jean-Marc, Bacq-Daian, Delphine, Bougé, Anne Laure, Philippe, Nicolas, Commes, Therese

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On the evaluation of the fidelity of supervised classifiers in the prediction of chimeric RNAs von Beaumeunier, Sacha, Audoux, Jérôme, Boureux, Anthony, Ruffle, Florence, Commes, Thérèse, Philippe, Nicolas, Alves, Ronnie

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Clinical evaluation of a low-coverage whole-genome test for detecting homologous recombination deficiency in ovarian cancer von Boidot, Romain, Blum, Michael G.B, Wissler, Marie-Pierre, Gottin, Celine, Ruzicka, Jiri, Chevrier, Sandy, Delhomme, Tiffany M, Audoux, Jerome, Jeanniard, Adrien, Just, Pierre-Alexandre, Harter, Philipp, Pignata, Sandro, Gonzalez-Martin, Antonio, Marth, Christian, Maenpaa, Johanna, Colombo, Nicoletta, Vergote, Ignace, Fujiwara, Keiichi, Duforet-Frebourg, Nicolas, Bertrand, Denis, Philippe, Nicolas, Ray-Coquard, Isabelle, Pujade-Lauraine, Eric

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Genome Alert!: A standardized procedure for genomic variant reinterpretation and automated gene–phenotype reassessment in clinical routine von Yauy, Kevin, Lecoquierre, François, Baert-Desurmont, Stéphanie, Trost, Detlef, Boughalem, Aicha, Luscan, Armelle, Costa, Jean-Marc, Geromel, Vanna, Raymond, Laure, Richard, Pascale, Coutant, Sophie, Broutin, Mélanie, Lanos, Raphael, Fort, Quentin, Cackowski, Stenzel, Testard, Quentin, Diallo, Abdoulaye, Soirat, Nicolas, Holder, Jean-Marc, Duforet-Frebourg, Nicolas, Bouge, Anne-Laure, Beaumeunier, Sacha, Bertrand, Denis, Audoux, Jerome, Genevieve, David, Mesnard, Laurent, Nicolas, Gael, Thevenon, Julien, Philippe, Nicolas

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Synthesis of new flat polyheterocyclic systems potential DNA intercalating agents diazines part 47 von Audoux, Jérôme, Achelle, Sylvain, Turck, Alain, Marsais, Francis, Plé, Nelly

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Easy Access to 3- or 5-Heteroarylamino-1,2,4-triazines by SNAr, SNH, and Palladium-Catalyzed N-Heteroarylations von GARNIER, Ethel, AUDOUX, Jérôme, PASQUINET, Eric, SUZENET, Franck, POULLAIN, Didier, LEBRET, Bruno, GUILLAUMET, Gérald

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DEVICE AND METHOD FOR DECISION SUPPORT IN STANDARDIZED PHENOTYPING von LARUE, Dimitri, DUFORET, Nicolas, YAUY, Kevin, BEAUMEUNIER, Sacha, AUDOUX, Jérome, PHILIPPE, Nicolas

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DEVICE AND METHOD FOR DECISION SUPPORT IN STANDARDIZED PHENOTYPING von LARUE, Dimitri, DUFORET, Nicolas, YAUY, Kevin, BEAUMEUNIER, Sacha, AUDOUX, Jérome, PHILIPPE, Nicolas

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A l’assaut du puzzle transcriptomique : optimisations, applications et nouvelles méthodes d’analyse pour le RNA-Seq von Audoux, Jérôme

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First functionalization by metallation of the pyridine moiety of 4-methoxypyridopyrimidines. Diazines: Part 38 von Audoux, Jérôme, Plé, Nelly, Turck, Alain, Quéguiner, Guy

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First functionalization by metallation of the pyridine moiety of pyridopyrimidin-4(3 H)-ones. Diazines. Part 36 von Audoux, Jérôme, Plé, Nelly, Turck, Alain, Quéguiner, Guy

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New chimeric RNAs in acute myeloid leukemia [version 1; peer review: 1 approved, 1 approved with reservations] von Rufflé, Florence, Audoux, Jerome, Boureux, Anthony, Beaumeunier, Sacha, Gaillard, Jean-Baptiste, Bou Samra, Elias, Megarbane, Andre, Cassinat, Bruno, Chomienne, Christine, Alves, Ronnie, Riquier, Sebastien, Gilbert, Nicolas, Lemaitre, Jean-Marc, Bacq-Daian, Delphine, Bougé, Anne Laure, Philippe, Nicolas, Commes, Therese

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Synthesis of 4,5-diarylquinazolines: a system with cofacial aromatic rings. Diazines. Part 39 von Busch, Alexandrine, Gautheron Chapoulaud, Valérie, Audoux, Jérôme, Plé, Nelly, Turck, Alain

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