PacBio Sequencing and Its Applications von Rhoads, Anthony, Au, Kin Fai

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Activation of Innate Immunity Is Required for Efficient Nuclear Reprogramming von Lee, Jieun, Sayed, Nazish, Hunter, Arwen, Au, Kin Fai, Wong, Wing H., Mocarski, Edward S., Pera, Renee Reijo, Yakubov, Eduard, Cooke, John P.

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Human tRNA synthetase catalytic nulls with diverse functions von Lo, Wing-Sze, Gardiner, Elisabeth, Xu, Zhiwen, Lau, Ching-Fun, Wang, Feng, Zhou, Jie J., Mendlein, John D., Nangle, Leslie A., Chiang, Kyle P., Yang, Xiang-Lei, Au, Kin-Fai, Wong, Wing Hung, Guo, Min, Zhang, Mingjie, Schimmel, Paul

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The blooming of long-read sequencing reforms biomedical research von Au, Kin Fai

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A comparative evaluation of hybrid error correction methods for error-prone long reads von Fu, Shuhua, Wang, Anqi, Au, Kin Fai

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Single-molecule long-read sequencing reveals a conserved intact long RNA profile in sperm von Sun, Yu H., Wang, Anqi, Song, Chi, Shankar, Goutham, Srivastava, Rajesh K., Au, Kin Fai, Li, Xin Zhiguo

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Lysine Methylation as a Routine Rescue Strategy for Protein Crystallization von Walter, Thomas S., Meier, Christoph, Assenberg, Rene, Au, Kin-Fai, Ren, Jingshan, Verma, Anil, Nettleship, Joanne E., Owens, Raymond J., Stuart, David I., Grimes, Jonathan M.

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Performance difference of graph-based and alignment-based hybrid error correction methods for error-prone long reads von Wang, Anqi, Au, Kin Fai

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Full‐length transcriptome sequences and splice variants obtained by a combination of sequencing platforms applied to different root tissues of Salvia miltiorrhiza and tanshinone bi... von Xu, Zhichao, Peters, Reuben J., Weirather, Jason, Luo, Hongmei, Liao, Baosheng, Zhang, Xin, Zhu, Yingjie, Ji, Aijia, Zhang, Bing, Hu, Songnian, Au, Kin Fai, Song, Jingyuan, Chen, Shilin

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Improving PacBio long read accuracy by short read alignment von Au, Kin Fai, Underwood, Jason G, Lee, Lawrence, Wong, Wing Hung

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Gaining comprehensive biological insight into the transcriptome by performing a broad-spectrum RNA-seq analysis von Sahraeian, Sayed Mohammad Ebrahim, Mohiyuddin, Marghoob, Sebra, Robert, Tilgner, Hagen, Afshar, Pegah T., Au, Kin Fai, Bani Asadi, Narges, Gerstein, Mark B., Wong, Wing Hung, Snyder, Michael P., Schadt, Eric, Lam, Hugo Y. K.

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One is not enough: On the effects of reference genome for the mapping and subsequent analyses of short-reads von Valiente-Mullor, Carlos, Beamud, Beatriz, Ansari, Ivan, Frances-Cuesta, Carlos, Garcia-Gonzalez, Neris, Mejia, Lorena, Ruiz-Hueso, Paula, Gonzalez-Candelas, Fernando

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A network-based computational framework to predict and differentiate functions for gene isoforms using exon-level expression data von Wang, Dingjie, Zou, Xiufen, Fai Au, Kin

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Comprehensive comparison of Pacific Biosciences and Oxford Nanopore Technologies and their applications to transcriptome analysis [version 2; peer review: 2 approved] von Weirather, Jason L, de Cesare, Mariateresa, Wang, Yunhao, Piazza, Paolo, Sebastiano, Vittorio, Wang, Xiu-Jie, Buck, David, Au, Kin Fai

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Characterization of the human ESC transcriptome by hybrid sequencing von Au, Kin Fai, Sebastiano, Vittorio, Afshar, Pegah Tootoonchi, Durruthy, Jens Durruthy, Lee, Lawrence, Williams, Brian A, van Bakel, Harm, Schadt, Eric E, Reijo-Pera, Renee A, Underwood, Jason G, Wong, Wing Hung

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The primate-specific noncoding RNA HPAT5 regulates pluripotency during human preimplantation development and nuclear reprogramming von Durruthy-Durruthy, Jens, Sebastiano, Vittorio, Wossidlo, Mark, Cepeda, Diana, Cui, Jun, Grow, Edward J, Davila, Jonathan, Mall, Moritz, Wong, Wing H, Wysocka, Joanna, Au, Kin Fai, Reijo Pera, Renee A

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IDP-ASE: haplotyping and quantifying allele-specific expression at the gene and gene isoform level by hybrid sequencing von Deonovic, Benjamin, Wang, Yunhao, Weirather, Jason, Wang, Xiu-Jie, Au, Kin Fai

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Single-molecule long-read sequencing reveals the chromatin basis of gene expression von Wang, Yunhao, Wang, Anqi, Liu, Zujun, Thurman, Andrew L, Powers, Linda S, Zou, Meng, Zhao, Yue, Hefel, Adam, Li, Yunyi, Zabner, Joseph, Au, Kin Fai

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ALS-associated mutation FUS-R521C causes DNA damage and RNA splicing defects von Qiu, Haiyan, Lee, Sebum, Shang, Yulei, Wang, Wen-Yuan, Au, Kin Fai, Kamiya, Sherry, Barmada, Sami J, Finkbeiner, Steven, Lui, Hansen, Carlton, Caitlin E, Tang, Amy A, Oldham, Michael C, Wang, Hejia, Shorter, James, Filiano, Anthony J, Roberson, Erik D, Tourtellotte, Warren G, Chen, Bin, Tsai, Li-Huei, Huang, Eric J

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E-C coupling structural protein junctophilin-2 encodes a stress-adaptive transcription regulator von Guo, Ang, Wang, Yihui, Chen, Biyi, Wang, Yunhao, Yuan, Jinxiang, Zhang, Liyang, Hall, Duane, Wu, Jennifer, Shi, Yun, Zhu, Qi, Chen, Cheng, Thiel, William H, Zhan, Xin, Weiss, Robert M, Zhan, Fenghuang, Musselman, Catherine A, Pufall, Miles, Zhu, Weizhong, Au, Kin Fai, Hong, Jiang, Anderson, Mark E, Grueter, Chad E, Song, Long-Sheng

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