Genome-Wide Quantitative Enhancer Activity Maps Identified by STARR-seq von Arnold, Cosmas D., Gerlach, Daniel, Stelzer, Christoph, Boryń, Łukasz M., Rath, Martina, Stark, Alexander

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Enhancer–core-promoter specificity separates developmental and housekeeping gene regulation von Zabidi, Muhammad A., Arnold, Cosmas D., Schernhuber, Katharina, Pagani, Michaela, Rath, Martina, Frank, Olga, Stark, Alexander

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Transcriptional cofactors display specificity for distinct types of core promoters von Haberle, Vanja, Arnold, Cosmas D., Pagani, Michaela, Rath, Martina, Schernhuber, Katharina, Stark, Alexander

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Hormone-Responsive Enhancer-Activity Maps Reveal Predictive Motifs, Indirect Repression, and Targeting of Closed Chromatin von Shlyueva, Daria, Stelzer, Christoph, Gerlach, Daniel, Yáñez-Cuna, J. Omar, Rath, Martina, Boryń, Łukasz M., Arnold, Cosmas D., Stark, Alexander

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Quantitative genome-wide enhancer activity maps for five Drosophila species show functional enhancer conservation and turnover during cis-regulatory evolution von Arnold, Cosmas D, Gerlach, Daniel, Spies, Daniel, Matts, Jessica A, Sytnikova, Yuliya A, Pagani, Michaela, Lau, Nelson C, Stark, Alexander

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STARR-seq — Principles and applications von Muerdter, Felix, Boryń, Łukasz M., Arnold, Cosmas D.

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Differential cofactor dependencies define distinct types of human enhancers von Neumayr, Christoph, Haberle, Vanja, Serebreni, Leonid, Karner, Katharina, Hendy, Oliver, Boija, Ann, Henninger, Jonathan E., Li, Charles H., Stejskal, Karel, Lin, Gen, Bergauer, Katharina, Pagani, Michaela, Rath, Martina, Mechtler, Karl, Arnold, Cosmas D., Stark, Alexander

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A high‐throughput method to identify trans‐activation domains within transcription factor sequences von Arnold, Cosmas D, Nemčko, Filip, Woodfin, Ashley R, Wienerroither, Sebastian, Vlasova, Anna, Schleiffer, Alexander, Pagani, Michaela, Rath, Martina, Stark, Alexander

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Resolving systematic errors in widely used enhancer activity assays in human cells von Muerdter, Felix, Boryń, Łukasz M, Woodfin, Ashley R, Neumayr, Christoph, Rath, Martina, Zabidi, Muhammad A, Pagani, Michaela, Haberle, Vanja, Kazmar, Tomáš, Catarino, Rui R, Schernhuber, Katharina, Arnold, Cosmas D, Stark, Alexander

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Genome-wide assessment of sequence-intrinsic enhancer responsiveness at single-base-pair resolution von Arnold, Cosmas D, Zabidi, Muhammad A, Pagani, Michaela, Rath, Martina, Schernhuber, Katharina, Kazmar, Tomáš, Stark, Alexander

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STARR‐seq and UMI‐STARR‐seq: Assessing Enhancer Activities for Genome‐Wide‐, High‐, and Low‐Complexity Candidate Libraries von Neumayr, Christoph, Pagani, Michaela, Stark, Alexander, Arnold, Cosmas D.

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Dissection of thousands of cell type-specific enhancers identifies dinucleotide repeat motifs as general enhancer features von Yáñez-Cuna, J Omar, Arnold, Cosmas D, Stampfel, Gerald, Boryń, Lukasz M, Gerlach, Daniel, Rath, Martina, Stark, Alexander

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An unbiased AAV-STARR-seq screen revealing the enhancer activity map of genomic regions in the mouse brain in vivo von Chan, Ya-Chien, Kienle, Eike, Oti, Martin, Di Liddo, Antonella, Mendez-Lago, Maria, Aschauer, Dominik F., Peter, Manuel, Pagani, Michaela, Arnold, Cosmas, Vonderheit, Andreas, Schön, Christian, Kreuz, Sebastian, Stark, Alexander, Rumpel, Simon

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Identification of ALK in Thinness von Orthofer, Michael, Valsesia, Armand, Mägi, Reedik, Wang, Qiao-Ping, Kaczanowska, Joanna, Kozieradzki, Ivona, Leopoldi, Alexandra, Cikes, Domagoj, Zopf, Lydia M., Tretiakov, Evgenii O., Demetz, Egon, Hilbe, Richard, Boehm, Anna, Ticevic, Melita, Nõukas, Margit, Jais, Alexander, Spirk, Katrin, Clark, Teleri, Amann, Sabine, Lepamets, Maarja, Neumayr, Christoph, Arnold, Cosmas, Dou, Zhengchao, Kuhn, Volker, Novatchkova, Maria, Cronin, Shane J.F., Tietge, Uwe J.F., Müller, Simone, Pospisilik, J. Andrew, Nagy, Vanja, Hui, Chi-Chung, Lazovic, Jelena, Esterbauer, Harald, Hagelkruys, Astrid, Tancevski, Ivan, Kiefer, Florian W., Harkany, Tibor, Haubensak, Wulf, Neely, G. Gregory, Metspalu, Andres, Hager, Jorg, Gheldof, Nele, Penninger, Josef M.

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METHOD FOR IDENTIFYING TRANSCRIPTIONAL REGULATORY ELEMENTS von STARK, ALEXANDER, ARNOLD, COSMAS

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Transcriptional cofactors display specificity for distinct types of core promoters von Haberle, Vanja, Arnold, Cosmas D, Pagani, Michaela, Rath, Martina, Schernhuber, Katharina, Stark, Alexander

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Transcriptional cofactors display specificity for distinct types of core promoters von Haberle, Vanja, Arnold, Cosmas D, Pagani, Michaela, Rath, Ma, Schernhuber, Katharina, Stark, Alexander

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Genome-wide assessment of sequence-intrinsic enhancer responsiveness at single-base-pair resolution von Arnold, Cosmas D, Zabidi, Muhammad A, Pagani, Michaela, Rath, Ma, Schernhuber, Katharina, Kazmar, Tomá[s caron], Stark, Alexander

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Enhancer-core-promoter specificity separates developmental and housekeeping gene regulation von Zabidi, Muhammad A, Arnold, Cosmas D, Schernhuber, Katharina, Pagani, Michaela, Rath, Ma, Frank, Olga, Stark, Alexander

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Enhancer-core-promoter specificity separates developmental and housekeeping gene regulation von Zabidi, Muhammad A, Arnold, Cosmas D, Schernhuber, Katharina, Pagani, Michaela, Rath, Martina, Frank, Olga, Stark, Alexander

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