How sulphate-reducing microorganisms cope with stress: lessons from systems biology von Zhou, Jizhong, He, Qiang, Hemme, Christopher L, Mukhopadhyay, Aindrila, Hillesland, Kristina, Zhou, Aifen, He, Zhili, Van Nostrand, Joy D, Hazen, Terry C, Stahl, David A, Wall, Judy D, Arkin, Adam P

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Chemogenomic profiling: identifying the functional interactions of small molecules in yeast von Giaever, G, Flaherty, P, Kumm, J, Proctor, M, Nislow, C, Jaramillo, D.F, Chu, A.M, Jordan, M.I, Arkin, A.P, Davis, R.W

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Impact of hydrologic boundaries on microbial planktonic and biofilm communities in shallow terrestrial subsurface environments von Smith, H.J, Zelaya, A.J, Leon, K.B. De, Chakraborty, R, Elias, D.A, Hazen, T.C, Arkin, A.P, Cunningham, A.B, Fields, M.W

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Hydrogen peroxide-induced oxidative stress responses in Desulfovibrio vulgaris Hildenborough von Zhou, Aifen, He, Zhili, Redding-Johanson, Alyssa M, Mukhopadhyay, Aindrila, Hemme, Christopher L, Joachimiak, Marcin P, Luo, Feng, Deng, Ye, Bender, Kelly S, He, Qiang, Keasling, Jay D, Stahl, David A, Fields, Matthew W, Hazen, Terry C, Arkin, Adam P, Wall, Judy D, Zhou, Jizhong

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Response of Desulfovibrio vulgaris to Alkaline Stress von STOLYAR, Sergey, QIANG HE, JIZHONG ZHOU, WALL, Judy D, ARKIN, Adam P, STAHL, David A, JOACHIMIAK, Marcin P, ZHILI HE, ZAMIN KOO YANG, BORGLIN, Sharon E, JOYNER, Dominique C, HUANG, Katherine, ALM, Eric, HAZEN, Terry C

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Temporal Transcriptomic Analysis as Desulfovibrio vulgaris Hildenborough Transitions into Stationary Phase during Electron Donor Depletion von Clark, M.E, He, Q, He, Z, Huang, K.H, Alm, E.J, Wan, X.-F, Hazen, T.C, Arkin, A.P, Wall, J.D, Zhou, J.-Z, Fields, M.W

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Orthologous transcription factors in bacteria have different functions and regulate different genes von Price, M.P, Dehal, P.S, Arkin, A.P

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Toward a rigorous network of protein-protein interactions of the model sulfate reducer Desulfovibrio vulgaris Hildenborough von Chhabra, S.R., Joachimiak, M.P., Petzold, C.J., Zane, G.M., Price, M.N., Gaucher, S., Reveco, S.A., Fok, V., Johanson, A.R., Batth, T.S., Singer, M., Chandonia, J.M., Joyner, D., Hazen, T.C., Arkin, A.P., Wall, J.D., Singh, A.K., Keasling, J.D.

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The electron transfer system of syntrophically grown Desulfovibrio vulgaris von Walker, C.B., He, Z., Yang, Z.K., Ringbauer, Jr., J.A., He, Q., Zhou, J., Voordouw, G., Wall, J.D., Arkin, A.P., Hazen, T.C., Stolyar, S., Stahl, D.A.

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Global transcriptional, physiological and metabolite analyses of Desulfovibrio vulgaris Hildenborough responses to salt adaptation von He, Z., Zhou, A., Baidoo, E., He, Q., Joachimiak, M. P., Benke, P., Phan, R., Mukhopadhyay, A., Hemme, C.L., Huang, K., Alm, E.J., Fields, M.W., Wall, J., Stahl, D., Hazen, T.C., Keasling, J.D., Arkin, A.P., Zhou, J.

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Temporal transcriptomic analyses of Desulfovibrio vulgarisHildenborough during electron donor depletion von Clark, M.E., He, Q., He, Z., Alm, E., Huang, K., Hazen, T.C., Arkin, A.P., Wall, J.D., Zhou, J., Fields, M.W.

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Temporal transcriptomic analysis of Desulfovibrio vulgaris Hildenborough transition into stationary phase growth during electrondonor depletion von Clark, M.E., He, Q., He, Z., Huang, K.H., Alm, E.J., Wan, X.-F., Hazen, T.C., Arkin, A.P., Wall, J.D., Zhou, J.-Z., Fields, M.W.

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Global Analysis of Heat Shock Response in Desulfovibrio vulgaris Hildenborough von Chhabra, S.R., He, Q., Huang, K.H., Gaucher, S.P., Alm, E.J., He,Z., Hadi, M.Z., Hazen, T.C., Wall, J.D., Zhou, J., Arkin, A.P., Singh, A.K.

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Processing Single-Cell Single-Molecule Genomic Information: New Methods for New Data von Samoilov, M.S., Arkin, A.P.

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Optimizing Nucleotide Mixtures to Encode Specific Subsets of Amino Acids for Semi-Random Mutagenesis von Arkin, Adam P, Youvan, Douglas C

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Visualization of Growth Curve Data from Phenotype Microarray Experiments von Jacobsen, J.S., Joyner, D.C., Borglin, S.E., Hazen, T.C., Arkin, A.P., Bethel, E.W.

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