Context-dependent control of alternative splicing by RNA-binding proteins von Fu, Xiang-Dong, Ares, Manuel

Volltext

Intron lariat spliceosomes convert lariats to true circles: implications for intron transposition von Ares, Jr, Manuel, Igel, Haller, Katzman, Sol, Donohue, John P

Volltext

The splicing regulator Rbfox1 (A2BP1) controls neuronal excitation in the mammalian brain von Black, Douglas L, Gehman, Lauren T, Stoilov, Peter, Maguire, Jamie, Damianov, Andrey, Lin, Chia-Ho, Shiue, Lily, Ares, Manuel, Mody, Istvan

Volltext

A post-transcriptional regulatory switch in polypyrimidine tract-binding proteins reprograms alternative splicing in developing neurons von Boutz, Paul L, Stoilov, Peter, Li, Qin, Lin, Chia-Ho, Chawla, Geetanjali, Ostrow, Kristin, Shiue, Lily, Ares, Jr, Manuel, Black, Douglas L

Volltext

Distinct and shared functions of ALS-associated proteins TDP-43, FUS and TAF15 revealed by multisystem analyses von Kapeli, Katannya, Pratt, Gabriel A., Vu, Anthony Q., Hutt, Kasey R., Martinez, Fernando J., Sundararaman, Balaji, Batra, Ranjan, Freese, Peter, Lambert, Nicole J., Huelga, Stephanie C., Chun, Seung J., Liang, Tiffany Y., Chang, Jeremy, Donohue, John P., Shiue, Lily, Zhang, Jiayu, Zhu, Haining, Cambi, Franca, Kasarskis, Edward, Hoon, Shawn, Ares Jr, Manuel, Burge, Christopher B., Ravits, John, Rigo, Frank, Yeo, Gene W.

Volltext

Broad variation in response of individual introns to splicing inhibitors in a humanized yeast strain von Hunter, Oarteze, Talkish, Jr, Jason, Quick-Cleveland, Jen, Igel, Haller, Tan, Asako, Kuersten, Scott, Katzman, Sol, Donohue, John Paul, Jurica, Melissa S, Ares, Jr, Manuel

Volltext

RBPmap: a web server for mapping binding sites of RNA-binding proteins von Paz, Inbal, Kosti, Idit, Ares, Jr, Manuel, Cline, Melissa, Mandel-Gutfreund, Yael

Volltext

Synthesis of modified nucleotide polymers by the poly(U) polymerase Cid1: application to direct RNA sequencing on nanopores von Vo, Jenny Mai, Mulroney, Logan, Quick-Cleveland, Jen, Jain, Miten, Akeson, Mark, Ares, Manuel

Volltext

Competition between Pre-mRNAs for the Splicing Machinery Drives Global Regulation of Splicing von Munding, Elizabeth M., Shiue, Lily, Katzman, Sol, Donohue, John Paul, Ares, Manuel

Volltext

The UCSC SARS-CoV-2 Genome Browser von Fernandes, Jason D., Hinrichs, Angie S., Clawson, Hiram, Gonzalez, Jairo Navarro, Lee, Brian T., Nassar, Luis R., Raney, Brian J., Rosenbloom, Kate R., Nerli, Santrupti, Rao, Arjun A., Schmelter, Daniel, Fyfe, Alastair, Maulding, Nathan, Zweig, Ann S., Lowe, Todd M., Ares, Manuel, Corbet-Detig, Russ, Kent, W. James, Haussler, David, Haeussler, Maximilian

Volltext

Methylene-Linked Bis-NHC Half-Sandwich Ruthenium Complexes: Binding of Small Molecules and Catalysis toward Ketone Transfer Hydrogenation von Botubol-Ares, José Manuel, Cordón-Ouahhabi, Safa, Moutaoukil, Zakaria, Collado, Isidro G, Jiménez-Tenorio, Manuel, Puerta, M. Carmen, Valerga, Pedro

Volltext

Genomewide Analysis of mRNA Processing in Yeast Using Splicing-Specific Microarrays von Clark, Tyson A., Sugnet, Charles W., Ares, Manuel

Volltext

Aberrant alternative splicing and extracellular matrix gene expression in mouse models of myotonic dystrophy von Osborne, Robert J, Shiue, Lily, Swanson, Maurice S, Du, Hongqing, Cline, Melissa S, Tuttle, Daniel L, Clark, Tyson A, Donohue, John Paul, Thornton, Charles A, Hall, Megan P, Ares, Manuel

Volltext

Evolution of ColE1-like plasmids across gamma-Proteobacteria: From bacteriocin production to antimicrobial resistance von Ares-Arroyo, Manuel, Rocha, Eduardo P. C., Gonzalez-Zorn, Bruno

Volltext

Human cells contain myriad excised linear intron RNAs with links to gene regulation and potential utility as biomarkers von Yao, Jun, Xu, Hengyi, Ferrick-Kiddie, Elizabeth A, Nottingham, Ryan M, Wu, Douglas C, Ares, Jr, Manuel, Lambowitz, Alan M

Volltext

Correction: Rapidly evolving protointrons in Saccharomyces genomes revealed by a hungry spliceosome von Talkish, Jason, Igel, Haller, Perriman, Rhonda J, Shiue, Lily, Katzman, Sol, Munding, Elizabeth M, Shelansky, Robert, Donohue, John Paul, Ares, Jr, Manuel

Volltext

Ultraconserved elements are associated with homeostatic control of splicing regulators by alternative splicing and nonsense-mediated decay von Ni, Julie Z, Grate, Leslie, Donohue, John Paul, Preston, Christine, Nobida, Naomi, O'Brien, Georgeann, Shiue, Lily, Clark, Tyson A, Blume, John E, Ares, Jr, Manuel

Volltext

The splicing regulator Rbfox2 is required for both cerebellar development and mature motor function von Gehman, Lauren T, Meera, Pratap, Stoilov, Peter, Shiue, Lily, O'Brien, Janelle E, Meisler, Miriam H, Ares, Jr, Manuel, Otis, Thomas S, Black, Douglas L

Volltext

An RNA gene expressed during cortical development evolved rapidly in humans von Lambert, Nelle, Haussler, David, Coppens, Sandra, Katzman, Sol, Pollard, Katherine S, King, Bryan, Siepel, Adam, Kern, Andrew D, Onodera, Courtney, Ares, Manuel, Lambot, Marie-Alexandra, Dehay, Colette, Vanderhaeghen, Pierre, Pedersen, Jakob S, Igel, Haller, Salama, Sofie R

Volltext

Rearrangement of competing U2 RNA helices within the spliceosome promotes multiple steps in splicing von Perriman, Rhonda J, Ares, Jr, Manuel

Volltext