Subgenomic flaviviral RNAs: What do we know after the first decade of research von Slonchak, Andrii, Khromykh, Alexander A.

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Zika virus noncoding RNA suppresses apoptosis and is required for virus transmission by mosquitoes von Slonchak, Andrii, Hugo, Leon E., Freney, Morgan E., Hall-Mendelin, Sonja, Amarilla, Alberto A., Torres, Francisco J., Setoh, Yin Xiang, Peng, Nias Y. G., Sng, Julian D. J., Hall, Roy A., van den Hurk, Andrew F., Devine, Gregor J., Khromykh, Alexander A.

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Structural analysis of 3’UTRs in insect flaviviruses reveals novel determinants of sfRNA biogenesis and provides new insights into flavivirus evolution von Slonchak, Andrii, Parry, Rhys, Pullinger, Brody, Sng, Julian D. J., Wang, Xiaohui, Buck, Teresa F., Torres, Francisco J., Harrison, Jessica J., Colmant, Agathe M. G., Hobson-Peters, Jody, Hall, Roy A., Tuplin, Andrew, Khromykh, Alexander A.

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Expression of mosquito microRNA Aae-miR-2940-5p is downregulated in response to West Nile virus infection to restrict viral replication von Slonchak, Andrii, Hussain, Mazhar, Torres, Shessy, Asgari, Sassan, Khromykh, Alexander A

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West Nile virus infection and interferon alpha treatment alter the spectrum and the levels of coding and noncoding host RNAs secreted in extracellular vesicles von Slonchak, Andrii, Clarke, Brian, Mackenzie, Jason, Amarilla, Alberto Anastacio, Setoh, Yin Xiang, Khromykh, Alexander A

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Noncoding RNA of Zika Virus Affects Interplay between Wnt-Signaling and Pro-Apoptotic Pathways in the Developing Brain Tissue von Slonchak, Andrii, Chaggar, Harman, Aguado, Julio, Wolvetang, Ernst, Khromykh, Alexander A

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Injection site vaccinology of a recombinant vaccinia-based vector reveals diverse innate immune signatures von Hazlewood, Jessamine E, Dumenil, Troy, Le, Thuy T, Slonchak, Andrii, Kazakoff, Stephen H, Patch, Ann-Marie, Gray, Lesley-Ann, Howley, Paul M, Liu, Liang, Hayball, John D, Yan, Kexin, Rawle, Daniel J, Prow, Natalie A, Suhrbier, Andreas

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The Flavivirus Non-Structural Protein 5 (NS5): Structure, Functions, and Targeting for Development of Vaccines and Therapeutics von Goh, Jarvis Z H, De Hayr, Lachlan, Khromykh, Alexander A, Slonchak, Andrii

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Lower temperatures reduce type I interferon activity and promote alphaviral arthritis von Prow, Natalie A, Tang, Bing, Gardner, Joy, Le, Thuy T, Taylor, Adam, Poo, Yee S, Nakayama, Eri, Hirata, Thiago D C, Nakaya, Helder I, Slonchak, Andrii, Mukhopadhyay, Pamela, Mahalingam, Suresh, Schroder, Wayne A, Klimstra, William, Suhrbier, Andreas

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The distinguishing NS5-M114V mutation in American Zika virus isolates has negligible impacts on virus replication and transmission potential von Peng, Nias Y G, Amarilla, Alberto A, Hugo, Leon E, Modhiran, Naphak, Sng, Julian D J, Slonchak, Andrii, Watterson, Daniel, Setoh, Yin Xiang, Khromykh, Alexander A

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Reporter Flaviviruses as Tools to Demonstrate Homologous and Heterologous Superinfection Exclusion von Torres, Francisco J, Parry, Rhys, Hugo, Leon E, Slonchak, Andrii, Newton, Natalee D, Vet, Laura J, Modhiran, Naphak, Pullinger, Brody, Wang, Xiaohui, Potter, James, Winterford, Clay, Hobson-Peters, Jody, Hall, Roy A, Khromykh, Alexander A

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Neural Epidermal Growth Factor-Like Like Protein 2 Is Expressed in Human Oligodendroglial Cell Types von Shaker, Mohammed R, Kahtan, Amna, Prasad, Renuka, Lee, Ju-Hyun, Pietrogrande, Giovanni, Leeson, Hannah C, Sun, Woong, Wolvetang, Ernst J, Slonchak, Andrii

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Determinants of Zika virus host tropism uncovered by deep mutational scanning von Setoh, Yin Xiang, Amarilla, Alberto A., Peng, Nias Y. G., Griffiths, Rebecca E., Carrera, Julio, Freney, Morgan E., Nakayama, Eri, Ogawa, Shinya, Watterson, Daniel, Modhiran, Naphak, Nanyonga, Faith Elizabeth, Torres, Francisco J., Slonchak, Andrii, Periasamy, Parthiban, Prow, Natalie A., Tang, Bing, Harrison, Jessica, Hobson-Peters, Jody, Cuddihy, Thom, Cooper-White, Justin, Hall, Roy A., Young, Paul R., Mackenzie, Jason M., Wolvetang, Ernst, Bloom, Jesse D., Suhrbier, Andreas, Khromykh, Alexander A.

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Helicase Domain of West Nile Virus NS3 Protein Plays a Role in Inhibition of Type I Interferon Signalling von Setoh, Yin Xiang, Periasamy, Parthiban, Peng, Nias Yong Gao, Amarilla, Alberto A, Slonchak, Andrii, Khromykh, Alexander A

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Sequencing of Historical Isolates, K-mer Mining and High Serological Cross-Reactivity with Ross River Virus Argue against the Presence of Getah Virus in Australia von Rawle, Daniel J., Nguyen, Wilson, Dumenil, Troy, Parry, Rhys, Warrilow, David, Tang, Bing, Le, Thuy T., Slonchak, Andrii, Khromykh, Alexander A., Lutzky, Viviana P., Yan, Kexin, Suhrbier, Andreas

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Human MicroRNA miR-532-5p Exhibits Antiviral Activity against West Nile Virus via Suppression of Host Genes SESTD1 and TAB3 Required for Virus Replication von Slonchak, Andrii, Shannon, Rory P, Pali, Gabor, Khromykh, Alexander A

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A novel tamanavirus ( Flaviviridae ) of the European common frog ( Rana temporaria ) from the UK von Parry, Rhys H, Slonchak, Andrii, Campbell, Lewis J, Newton, Natalee D, Debat, Humberto J, Gifford, Robert J, Khromykh, Alexander A

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Xinyang flavivirus, from Haemaphysalis flava ticks in Henan Province, China, defines a basal, likely tick-only Orthoflavivirus clade von Wang, Lan-Lan, Cheng, Qia, Newton, Natalee D, Wolfinger, Michael T, Morgan, Mahali S, Slonchak, Andrii, Khromykh, Alexander A, Cheng, Tian-Yin, Parry, Rhys H

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Choroid plexus defects in Down syndrome brain organoids enhance neurotropism of SARS-CoV-2 von Shaker, Mohammed R, Slonchak, Andrii, Al-Mhanawi, Bahaa, Morrison, Sean D, Sng, Julian D J, Cooper-White, Justin, Khromykh, Alexander A, Wolvetang, Ernst J

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Zika virus noncoding RNA cooperates with the viral protein NS5 to inhibit STAT1 phosphorylation and facilitate viral pathogenesis von Slonchak, Andrii, Wang, Xiaohui, Aguado, Julio, Sng, Julian D J, Chaggar, Harman, Freney, Morgan E, Yan, Kexin, Torres, Francisco J, Amarilla, Alberto A, Balea, Rickyle, Setoh, Yin Xiang, Peng, Nias, Watterson, Daniel, Wolvetang, Ernst, Suhrbier, Andreas, Khromykh, Alexander A

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