The three-dimensional genome: regulating gene expression during pluripotency and development von Andrey, Guillaume, Mundlos, Stefan

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A Switch Between Topological Domains Underlies HoxD Genes Collinearity in Mouse Limbs von Andrey, Guillaume, Montavon, Thomas, Mascrez, Bénédicte, Gonzalez, Federico, Noordermeer, Daan, Leleu, Marion, Trono, Didier, Spitz, François, Duboule, Denis

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Polymer physics predicts the effects of structural variants on chromatin architecture von Bianco, Simona, Lupiáñez, Darío G., Chiariello, Andrea M., Annunziatella, Carlo, Kraft, Katerina, Schöpflin, Robert, Wittler, Lars, Andrey, Guillaume, Vingron, Martin, Pombo, Ana, Mundlos, Stefan, Nicodemi, Mario

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Cell-specific alterations in Pitx1 regulatory landscape activation caused by the loss of a single enhancer von Rouco, Raquel, Bompadre, Olimpia, Rauseo, Antonella, Fazio, Olivier, Peraldi, Rodrigue, Thorel, Fabrizio, Andrey, Guillaume

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Formation of new chromatin domains determines pathogenicity of genomic duplications von Franke, Martin, Ibrahim, Daniel M., Andrey, Guillaume, Schwarzer, Wibke, Heinrich, Verena, Schöpflin, Robert, Kraft, Katerina, Kempfer, Rieke, Jerković, Ivana, Chan, Wing-Lee, Spielmann, Malte, Timmermann, Bernd, Wittler, Lars, Kurth, Ingo, Cambiaso, Paola, Zuffardi, Orsetta, Houge, Gunnar, Lambie, Lindsay, Brancati, Francesco, Pombo, Ana, Vingron, Martin, Spitz, Francois, Mundlos, Stefan

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Serial genomic inversions induce tissue-specific architectural stripes, gene misexpression and congenital malformations von Kraft, Katerina, Magg, Andreas, Heinrich, Verena, Riemenschneider, Christina, Schöpflin, Robert, Markowski, Julia, Ibrahim, Daniel M., Acuna-Hidalgo, Rocío, Despang, Alexandra, Andrey, Guillaume, Wittler, Lars, Timmermann, Bernd, Vingron, Martin, Mundlos, Stefan

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Characterization of hundreds of regulatory landscapes in developing limbs reveals two regimes of chromatin folding von Andrey, Guillaume, Schöpflin, Robert, Jerković, Ivana, Heinrich, Verena, Ibrahim, Daniel M, Paliou, Christina, Hochradel, Myriam, Timmermann, Bernd, Haas, Stefan, Vingron, Martin, Mundlos, Stefan

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Dynamic 3D chromatin architecture contributes to enhancer specificity and limb morphogenesis von Kragesteen, Bjørt K., Spielmann, Malte, Paliou, Christina, Heinrich, Verena, Schöpflin, Robert, Esposito, Andrea, Annunziatella, Carlo, Bianco, Simona, Chiariello, Andrea M., Jerković, Ivana, Harabula, Izabela, Guckelberger, Philine, Pechstein, Michael, Wittler, Lars, Chan, Wing-Lee, Franke, Martin, Lupiáñez, Darío G., Kraft, Katerina, Timmermann, Bernd, Vingron, Martin, Visel, Axel, Nicodemi, Mario, Mundlos, Stefan, Andrey, Guillaume

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Pre-hypertrophic chondrogenic enhancer landscape of limb and axial skeleton development von Darbellay, Fabrice, Ramisch, Anna, Lopez-Delisle, Lucille, Kosicki, Michael, Rauseo, Antonella, Jouini, Zahra, Visel, Axel, Andrey, Guillaume

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Context-dependent enhancer function revealed by targeted inter-TAD relocation von Bolt, Christopher Chase, Lopez-Delisle, Lucille, Hintermann, Aurélie, Mascrez, Bénédicte, Rauseo, Antonella, Andrey, Guillaume, Duboule, Denis

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Similarities and differences in the regulation of HoxD genes during chick and mouse limb development von Yakushiji-Kaminatsui, Nayuta, Lopez-Delisle, Lucille, Bolt, Christopher Chase, Andrey, Guillaume, Beccari, Leonardo, Duboule, Denis

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Deletions, Inversions, Duplications: Engineering of Structural Variants using CRISPR/Cas in Mice von Kraft, Katerina, Geuer, Sinje, Will, Anja J., Chan, Wing Lee, Paliou, Christina, Borschiwer, Marina, Harabula, Izabela, Wittler, Lars, Franke, Martin, Ibrahim, Daniel M., Kragesteen, Bjørt K., Spielmann, Malte, Mundlos, Stefan, Lupiáñez, Darío G., Andrey, Guillaume

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A gene desert required for regulatory control of pleiotropic Shox2 expression and embryonic survival von Abassah-Oppong, Samuel, Zoia, Matteo, Mannion, Brandon J., Rouco, Raquel, Tissières, Virginie, Spurrell, Cailyn H., Roland, Virginia, Darbellay, Fabrice, Itum, Anja, Gamart, Julie, Festa-Daroux, Tabitha A., Sullivan, Carly S., Kosicki, Michael, Rodríguez-Carballo, Eddie, Fukuda-Yuzawa, Yoko, Hunter, Riana D., Novak, Catherine S., Plajzer-Frick, Ingrid, Tran, Stella, Akiyama, Jennifer A., Dickel, Diane E., Lopez-Rios, Javier, Barozzi, Iros, Andrey, Guillaume, Visel, Axel, Pennacchio, Len A., Cobb, John, Osterwalder, Marco

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Genome-Wide Binding of Posterior HOXA/D Transcription Factors Reveals Subgrouping and Association with CTCF von Jerković, Ivana, Ibrahim, Daniel M, Andrey, Guillaume, Haas, Stefan, Hansen, Peter, Janetzki, Catrin, González Navarrete, Irene, Robinson, Peter N, Hecht, Jochen, Mundlos, Stefan

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Chromatin topology in development and disease von Bompadre, Olimpia, Andrey, Guillaume

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Genetic cold cases: lessons from solving complex congenital limb disorders von Andrey, Guillaume, Duboule, Denis

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CRISPR/Cas9 Genome Editing in Embryonic Stem Cells von Andrey, Guillaume, Spielmann, Malte

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Large genomic insertion at the Shh locus results in hammer toes through enhancer adoption von Paliou, Christina, Andrey, Guillaume

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MAZ regulates chromatin domain insulation and genome architecture von Darbellay, Fabrice, Rouco, Raquel, Andrey, Guillaume

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SnapShot: Hox Gene Regulation von Andrey, Guillaume, Duboule, Denis

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