A Compact Structure of Cytochrome c Trapped in a Lysine-Ligated State: Loop Refolding and Functional Implications of a Conformational Switch von Amacher, Jeanine F, Zhong, Fangfang, Lisi, George P, Zhu, Michael Q, Alden, Stephanie L, Hoke, Kevin R, Madden, Dean R, Pletneva, Ekaterina V

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Specificity in PDZ-peptide interaction networks: Computational analysis and review von Amacher, Jeanine F., Brooks, Lionel, Hampton, Thomas H., Madden, Dean R.

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Domain Analysis and Motif Matcher (DAMM): A Program to Predict Selectivity Determinants in Monosiga brevicollis PDZ Domains Using Human PDZ Data von Wofford, Haley A., Myers-Dean, Josh, Vogel, Brandon A., Alamo, Kevin Alexander Estrada, Longshore-Neate, Frederick A., Jagodzinski, Filip, Amacher, Jeanine F.

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Stereochemical Preferences Modulate Affinity and Selectivity among Five PDZ Domains that Bind CFTR: Comparative Structural and Sequence Analyses von Amacher, Jeanine F., Cushing, Patrick R., Brooks, Lionel, Boisguerin, Prisca, Madden, Dean R.

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Chemically modified peptide scaffolds target the CFTR-associated ligand PDZ domain von Amacher, Jeanine F, Zhao, Ruizhi, Spaller, Mark R, Madden, Dean R

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Sortases: structure, mechanism, and implications for protein engineering von Amacher, Jeanine F., Antos, John M.

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An Idea to Explore: Engaging High School Students in Structure-Function Studies of Bacterial Sortase Enzymes and Inhibitors -- A Comprehensive Computational Experimental Pipeline von Godse, Shivani, Sapar, Tanvi, Amacher, Jeanine F

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Saturation mutagenesis of a predicted ancestral Syk‐family kinase von Hobbs, Helen T., Shah, Neel H., Shoemaker, Sophie R., Amacher, Jeanine F., Marqusee, Susan, Kuriyan, John

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Amino acid variability at W194 of Staphylococcus aureus sortase A alters nucleophile specificity von Kodama, Hanna M., Lindblom, Katy M., Walkenhauer, Erich G., Antos, John M., Amacher, Jeanine F.

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Intracellular Delivery of Peptidyl Ligands by Reversible Cyclization: Discovery of a PDZ Domain Inhibitor that Rescues CFTR Activity von Qian, Ziqing, Xu, Xiaohua, Amacher, Jeanine F., Madden, Dean R., Cormet-Boyaka, Estelle, Pei, Dehua

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A Phosphosite within the SH2 Domain of Lck Regulates Its Activation by CD45 von Courtney, Adam H., Amacher, Jeanine F., Kadlecek, Theresa A., Mollenauer, Marianne N., Au-Yeung, Byron B., Kuriyan, John, Weiss, Arthur

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MotifAnalyzer‐PDZ: A computational program to investigate the evolution of PDZ‐binding target specificity von Valgardson, Jordan, Cosbey, Robin, Houser, Paul, Rupp, Milo, Van Bronkhorst, Raiden, Lee, Michael, Jagodzinski, Filip, Amacher, Jeanine F.

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Sequence variation in the β7–β8 loop of bacterial class A sortase enzymes alters substrate selectivity von Piper, Isabel M., Struyvenberg, Sarah A., Valgardson, Jordan D., Johnson, D. Alex, Gao, Melody, Johnston, Katherine, Svendsen, Justin E., Kodama, Hanna M., Hvorecny, Kelli L., Antos, John M., Amacher, Jeanine F.

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Structural and biochemical analyses of selectivity determinants in chimeric Streptococcus Class A sortase enzymes von Gao, Melody, Johnson, D. Alex, Piper, Isabel M., Kodama, Hanna M., Svendsen, Justin E., Tahti, Elise, Longshore‐Neate, Frederick, Vogel, Brandon, Antos, John M., Amacher, Jeanine F.

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Structures of Streptococcus pyogenes class A sortase in complex with substrate and product mimics provide key details of target recognition von Johnson, D. Alex, Piper, Isabel M., Vogel, Brandon A., Jackson, Sophie N., Svendsen, Justin E., Kodama, Hanna M., Lee, Darren E., Lindblom, Katy M., McCarty, James, Antos, John M., Amacher, Jeanine F.

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Additive energetic contributions of multiple peptide positions determine the relative promiscuity of viral and human sequences for PDZ domain targets von Tahti, Elise F., Blount, Jadon M., Jackson, Sophie N., Gao, Melody, Gill, Nicholas P., Smith, Sarah N., Pederson, Nick J., Rumph, Simone N., Struyvenberg, Sarah A., Mackley, Iain G. P., Madden, Dean R., Amacher, Jeanine F.

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Phosphorylation control of the ubiquitin ligase Cbl is conserved in choanoflagellates von Amacher, Jeanine F., Hobbs, Helen T., Cantor, Aaron C., Shah, Lochan, Rivero, Marco‐Jose, Mulchand, Sarah A., Kuriyan, John

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Structural characterization and computational analysis of PDZ domains in Monosiga brevicollis von Gao, Melody, Mackley, Iain G. P., Mesbahi‐Vasey, Samaneh, Bamonte, Haley A., Struyvenberg, Sarah A., Landolt, Louisa, Pederson, Nick J., Williams, Lucy I., Bahl, Christopher D., Brooks, Lionel, Amacher, Jeanine F.

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Stereochemical determinants of C-terminal specificity in PDZ peptide-binding domains: a novel contribution of the carboxylate-binding loop von Amacher, Jeanine F, Cushing, Patrick R, Bahl, Christopher D, Beck, Tobias, Madden, Dean R

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Correction to “A Compact Structure of Cytochrome c Trapped in a Lysine-Ligated State: Loop Refolding and Functional Implications of a Conformational Switch” von Amacher, Jeanine F, Zhong, Fangfang, Lisi, George P, Zhu, Michael Q, Alden, Stephanie L, Hoke, Kevin R, Madden, Dean R, Pletneva, Ekaterina V

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