Nucleosome positioning as a determinant of exon recognition von Sammeth, Michael, Althammer, Sonja, Beato, Miguel, Guigó, Roderic, Nikolaou, Christoforos, Valcárcel, Juan, Tilgner, Hagen

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Pyicos: a versatile toolkit for the analysis of high-throughput sequencing data von Althammer, Sonja, González-Vallinas, Juan, Ballaré, Cecilia, Beato, Miguel, Eyras, Eduardo

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Nucleosome-Driven Transcription Factor Binding and Gene Regulation von Ballaré, Cecilia, Castellano, Giancarlo, Gaveglia, Laura, Althammer, Sonja, González-Vallinas, Juan, Eyras, Eduardo, Le Dily, Francois, Zaurin, Roser, Soronellas, Daniel, Vicent, Guillermo P., Beato, Miguel

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Automated image analysis of NSCLC biopsies to predict response to anti-PD-L1 therapy von Althammer, Sonja, Tan, Tze Heng, Spitzmüller, Andreas, Rognoni, Lorenz, Wiestler, Tobias, Herz, Thomas, Widmaier, Moritz, Rebelatto, Marlon C, Kaplon, Helene, Damotte, Diane, Alifano, Marco, Hammond, Scott A, Dieu-Nosjean, Marie-Caroline, Ranade, Koustubh, Schmidt, Guenter, Higgs, Brandon W, Steele, Keith E

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Structural constraints revealed in consistent nucleosome positions in the genome of S. cerevisiae von Nikolaou, Christoforos, Althammer, Sonja, Beato, Miguel, Guigó, Roderic

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An evolutionary and structural characterization of mammalian protein complex organization von Wong, Philip, Althammer, Sonja, Hildebrand, Andrea, Kirschner, Andreas, Pagel, Philipp, Geissler, Bernd, Smialowski, Pawel, Blöchl, Florian, Oesterheld, Matthias, Schmidt, Thorsten, Strack, Normann, Theis, Fabian J, Ruepp, Andreas, Frishman, Dmitrij

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Predictive Models of Gene Regulation from High-Throughput Epigenomics Data von Althammer, Sonja, Eyras, Eduardo, Pagès, Amadís

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Mutually exclusive expression of CD73 and PDL1 in tumors from patients (pt) with NSCLC, gastroesophageal (GE) and urothelial bladder carcinoma (UBC) von Martin, Philip, Spitzmueller, Andreas, Wu, Song, Widmaier, Moritz, KORN, RENE, Althammer, Sonja, Zha, Jiping, Higgs, Brandon W., Cooper, Zachary, Steele, Keith

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High-Throughput Sequencing to Identify Cytogenetic and Molecular Genetic Aberrations in 24 AML Exomes von Althammer, Sonja, de Albuquerque, Andreia, Nadarajah, Niroshan, Meggendorfer, Manja, Schnittger, Susanne, Kern, Wolfgang, Haferlach, Torsten, Haferlach, Claudia

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Pyicos: a versatile toolkit for the analysis of high-throughput sequencing data von Althammer, Sonja Daniela, González-Vallinas Rostes, Juan, 1983, Ballaré, Cecilia Julia, Beato, Miguel, Eyras Jiménez, Eduardo

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Nucleosome-driven transcription factor binding and gene regulation von Ballaré, Cecilia Julia, Castellano, Giancarlo, Gaveglia, Laura, Althammer, Sonja Daniela, González-Vallinas Rostes, Juan, 1983, Eyras Jiménez, Eduardo, Le Dily, François, Zaurín Quer, Roser, Soronellas, Daniel, Vicent, Guillermo Pablo, Beato, Miguel

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Predictive Models of Gene Regulation from High-Throughput Epigenomics Data von Althammer, Sonja, Eyras, Eduardo, Pagès, Amadís

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Structural constraints revealed in consistent nucleosome positions in the genome of S. cerevisiae von Nikolaou, Christoforos, Althammer, Sonja Daniela, Beato, Miguel, Guigó Serra, Roderic

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Elucidating mechanisms of gene regulation. Integration of high-throughput sequencing data for studying the epigenome von Althammer, Sonja Daniela

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31st Annual Meeting and Associated Programs of the Society for Immunotherapy of Cancer (SITC 2016): late breaking abstracts: National Harbor, MD, USA. 9-13 November 2016 von Althammer, Sonja, Steele, Keith, Rebelatto, Marlon, Tan, Tze Heng, Wiestler, Tobias, Schmidt, Guenter, Higgs, Brandon, Li, Xia, Shi, Li, Jin, Xiaoping, Antal, Joyce, Gupta, Ashok, Ranade, Koustubh, Binning, Gerd, Bellmunt, Joaquim, de Wit, Ronald, Vaughn, David J., Fradet, Yves, Lee, Jae Lyun, Fong, Lawrence, Vogelzang, Nicholas J., Climent, Miguel A., Petrylak, Daniel P., Choueiri, Toni K., Necchi, Andrea, Gerritsen, Winald, Gurney, Howard, Quinn, David I., Culine, Stéphane, Sternberg, Cora N., Mai, Yabing, Puhlmann, Markus, Perini, Rodolfo F., Bajorin, Dean F., Sharma, Padmanee, Callahan, Margaret K., Calvo, Emiliano, Kim, Joseph W., de Braud, Filipo, Ott, Patrick A., Bono, Petri, Pillai, Rathi N., Morse, Michael, Le, Dung T., Taylor, Matthew, Spilliopoulou, Pavlina, Bendell, Johanna, Jaeger, Dirk, Chan, Emily, Antonia, Scott J., Ascierto, Paolo A., Hennicken, Delphine, Tschaika, Marina, Azrilevich, Alex, Rosenberg, Jonathan, Levy, Ofer, Chan, Christopher, Cojocaru, Gady, Liang, Spencer, Ophir, Eran, Ganguly, Sudipto, Toporik, Amir, Kotturi, Maya, Kfir, Tal Fridman, Murter, Benjamin M., Logronio, Kathryn, Dassa, Liat, Leung, Ling, Greenwald, Shirley, Azulay, Meir, Kumar, Sandeep, Alteber, Zoya, Pan, Xiaoyu, Machlenkin, Arthur, Benita, Yair, Drake, Andrew W., Chajut, Ayelet, Salomon, Ran, Vankin, Ilan, Safyon, Einav, Hunter, John, Levine, Zurit, White, Mark, Leidner, Rom, Kang, Hyunseok, Haddad, Robert, Segal, Neil H., Wirth, Lori J., Ferris, Robert L., Hodi, F. Stephen, Sanborn, Rachel E., Gajewski, Thomas F., Sharfman, William, McDonald, Dan, Srivastava, Shivani, Gu, Xuemin, Phillips, Penny, Passey, Chaitali, Seiwert, Tanguy, Habtetsion, Tsadik

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Pyicos: A Flexible Tool Library for Analyzing Protein-Nucleotide Interactions with Mapped Reads from Deep Sequencing von González-Vallinas, Juan, Althammer, Sonja, Eyras, Eduardo

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Detecting and visualizing correlations between measured correlation values and correlation reference values of a pathway von Schmidt, Guenter, Schoenmeyer, Ralf, Althammer, Sonja

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Detecting and Visualizing Correlations Between Measured Correlation Values and Correlation Reference Values of a Pathway von Schmidt Guenter, Schoenmeyer Ralf, Althammer Sonja

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DETECTING AND VISUALIZING CORRELATIONS BETWEEN MEASURED CORRELATION VALUES AND CORRELATION REFERENCE VALUES OF A PATHWAY von SCHMIDT, Günter, ALTHAMMER, Sonja, SCHÖNMEYER, Ralf

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METHODS FOR TREATMENT AND SELECTION OF PATIENTS RESPONSIVE TO IMMUNE MEDIATED CANCER THERAPY von SCHMIDT, Gunter, BINNIG, Gerd, ALTHAMMER, Sonja, HIGGS, Brandon, STEELE, Keith

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