Probing the evolution, ecology and physiology of marine protists using transcriptomics von Caron, David A., Alexander, Harriet, Allen, Andrew E., Archibald, John M., Armbrust, E. Virginia, Bachy, Charles, Bell, Callum J., Bharti, Arvind, Dyhrman, Sonya T., Guida, Stephanie M., Heidelberg, Karla B., Kaye, Jonathan Z., Metzner, Julia, Smith, Sarah R., Worden, Alexandra Z.

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Influence of nutrient supply on plankton microbiome biodiversity and distribution in a coastal upwelling region von James, Chase C., Barton, Andrew D., Allen, Lisa Zeigler, Lampe, Robert H., Rabines, Ariel, Schulberg, Anne, Zheng, Hong, Goericke, Ralf, Goodwin, Kelly D., Allen, Andrew E.

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Transcriptional Orchestration of the Global Cellular Response of a Model Pennate Diatom to Diel Light Cycling under Iron Limitation von Smith, Sarah R, Gillard, Jeroen T F, Kustka, Adam B, McCrow, John P, Badger, Jonathan H, Zheng, Hong, New, Ashley M, Dupont, Chris L, Obata, Toshihiro, Fernie, Alisdair R, Allen, Andrew E

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Phytoplankton–bacterial interactions mediate micronutrient colimitation at the coastal Antarctic sea ice edge von Bertrand, Erin M., McCrow, John P., Moustafa, Ahmed, Zheng, Hong, McQuaid, Jeffrey B., Delmont, Tom O., Post, Anton F., Sipler, Rachel E., Spackeen, Jenna L., Xu, Kai, Bronk, Deborah A., Hutchins, David A., Allen, Andrew E.

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Endemic, cosmopolitan, and generalist taxa and their habitat affinities within a coastal marine microbiome von James, Chase C., Allen, Andrew E., Lampe, Robert H., Rabines, Ariel, Barton, Andrew D.

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Biosynthesis of the neurotoxin domoic acid in a bloom-forming diatom von Brunson, John K, McKinnie, Shaun M K, Chekan, Jonathan R, McCrow, John P, Miles, Zachary D, Bertrand, Erin M, Bielinski, Vincent A, Luhavaya, Hanna, Oborník, Miroslav, Smith, G Jason, Hutchins, David A, Allen, Andrew E, Moore, Bradley S

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Efficiency of the CO₂-concentrating mechanism of diatoms von Hopkinson, Brian M, Dupont, Christopher L, Allen, Andrew E, Morel, François M.M

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Evolution and metabolic significance of the urea cycle in photosynthetic diatoms von Allen, Andrew E., Dupont, Christopher L., Oborník, Miroslav, Horák, Aleš, Nunes-Nesi, Adriano, McCrow, John P., Zheng, Hong, Johnson, Daniel A., Hu, Hanhua, Fernie, Alisdair R., Bowler, Chris

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Manganese and iron deficiency in Southern Ocean Phaeocystis antarctica populations revealed through taxon-specific protein indicators von Wu, Miao, McCain, J. Scott P., Rowland, Elden, Middag, Rob, Sandgren, Mats, Allen, Andrew E., Bertrand, Erin M.

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Evolution and regulation of nitrogen flux through compartmentalized metabolic networks in a marine diatom von Smith, Sarah R., Dupont, Chris L., McCarthy, James K., Broddrick, Jared T., Oborník, Miroslav, Horák, Aleš, Füssy, Zoltán, Cihlář, Jaromír, Kleessen, Sabrina, Zheng, Hong, McCrow, John P., Hixson, Kim K., Araújo, Wagner L., Nunes-Nesi, Adriano, Fernie, Alisdair, Nikoloski, Zoran, Palsson, Bernhard O., Allen, Andrew E.

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Comparative metatranscriptomics identifies molecular bases for the physiological responses of phytoplankton to varying iron availability von Marchetti, Adrian, Schruth, David M, Durkin, Colleen A, Parker, Micaela S, Kodner, Robin B, Berthiaume, Chris T, Morales, Rhonda, Allen, Andrew E, Armbrust, E. Virginia

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Genome-Scale Model Reveals Metabolic Basis of Biomass Partitioning in a Model Diatom von Levering, Jennifer, Broddrick, Jared, Dupont, Christopher L, Peers, Graham, Beeri, Karen, Mayers, Joshua, Gallina, Alessandra A, Allen, Andrew E, Palsson, Bernhard O, Zengler, Karsten

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Host and Water Microbiota Are Differentially Linked to Potential Human Pathogen Accumulation in Oysters von Diner, Rachel E, Zimmer-Faust, Amy, Cooksey, Emily, Allard, Sarah, Kodera, Sho M, Kunselman, Emily, Garodia, Yash, Verhougstraete, Marc P, Allen, Andrew E, Griffith, John, Gilbert, Jack A

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A Novel Protein, Ubiquitous in Marine Phytoplankton, Concentrates Iron at the Cell Surface and Facilitates Uptake von Morrissey, Joe, Sutak, Robert, Paz-Yepes, Javier, Tanaka, Atsuko, Moustafa, Ahmed, Veluchamy, Alaguraj, Thomas, Yann, Botebol, Hugo, Bouget, François-Yves, McQuaid, Jeffrey B., Tirichine, Leila, Allen, Andrew E., Lesuisse, Emmanuel, Bowler, Chris

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Designer diatom episomes delivered by bacterial conjugation von Karas, Bogumil J., Diner, Rachel E., Lefebvre, Stephane C., McQuaid, Jeff, Phillips, Alex P.R., Noddings, Chari M., Brunson, John K., Valas, Ruben E., Deerinck, Thomas J., Jablanovic, Jelena, Gillard, Jeroen T.F., Beeri, Karen, Ellisman, Mark H., Glass, John I., Hutchison III, Clyde A., Smith, Hamilton O., Venter, J. Craig, Allen, Andrew E., Dupont, Christopher L., Weyman, Philip D.

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Downregulation of mitochondrial alternative oxidase affects chloroplast function, redox status and stress response in a marine diatom von Murik, Omer, Tirichine, Leila, Prihoda, Judit, Thomas, Yann, Araújo, Wagner L., Allen, Andrew E., Fernie, Alisdair R., Bowler, Chris

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Whole transcriptome analysis of the silicon response of the diatom Thalassiosira pseudonana von Shrestha, Roshan Prakash, Tesson, Benoit, Norden-Krichmar, Trina, Federowicz, Stephen, Hildebrand, Mark, Allen, Andrew E

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Nitrate Reductase Knockout Uncouples Nitrate Transport from Nitrate Assimilation and Drives Repartitioning of Carbon Flux in a Model Pennate Diatom von McCarthy, James K., Smith, Sarah R., McCrow, John P., Tan, Maxine, Zheng, Hong, Beeri, Karen, Roth, Robyn, Lichtle, Christian, Goodenough, Ursula, Bowler, Chris P., Dupont, Christopher L., Allen, Andrew E.

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Pervasive iron limitation at subsurface chlorophyll maxima of the California Current von Hogle, Shane L., Dupont, Christopher L., Hopkinson, Brian M., King, Andrew L., Buck, Kristen N., Roe, Kelly L., Stuart, Rhona K., Allen, Andrew E., Mann, Elizabeth L., Johnson, Zackary I., Barbeau, Katherine A.

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Multiplexed Knockouts in the Model Diatom Phaeodactylum by Episomal Delivery of a Selectable Cas9 von Moosburner, Mark Andrew, Gholami, Pardis, McCarthy, James K, Tan, Maxine, Bielinski, Vincent A, Allen, Andrew E

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