Prediction of Survival in Diffuse Large-B-Cell Lymphoma Based on the Expression of Six Genes von Lossos, Izidore S, Czerwinski, Debra K, Alizadeh, Ash A, Wechser, Mark A, Tibshirani, Rob, Botstein, David, Levy, Ronald

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Gene expression signature of fibroblast serum response predicts human cancer progression: similarities between tumors and wounds von Chang, Howard Y, Sneddon, Julie B, Alizadeh, Ash A, Sood, Ruchira, West, Rob B, Montgomery, Kelli, Chi, Jen-Tsan, van de Rijn, Matt, Botstein, David, Brown, Patrick O

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Targetable genetic alterations of TCF4 (E2-2) drive immunoglobulin expression in diffuse large B cell lymphoma von Jain, N, Hartert, K, Tadros, S, Fiskus, W, Havranek, O, Ma, MCJ, Bouska, A, Heavican, T, Kumar, D, Deng, Q, Moore, D, Pak, C, Liu, CL, Gentles, AJ, Hartmann, E, Kridel, R, Smedby, KE, Juliusson, G, Rosenquist, R, Gascoyne, RD, Rosenwald, A, Giancotti, F, Neelapu, SS, Westin, J, Vose, JM, Lunning, MA, Greiner, T, Rodig, S, Iqbal, J, Alizadeh, AA, Davis, RE, Bhalla, K, Green, MR

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Individuality and Variation in Gene Expression Patterns in Human Blood von Whitney, Adeline R., Diehn, Maximilian, Popper, Stephen J., Alizadeh, Ash A., Boldrick, Jennifer C., Relman, David A., Brown, Patrick O.

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SOURCE: a unified genomic resource of functional annotations, ontologies, and gene expression data von Diehn, Maximilian, Sherlock, Gavin, Binkley, Gail, Jin, Heng, Matese, John C., Hernandez-Boussard, Tina, Rees, Christian A., Cherry, J. Michael, Botstein, David, Brown, Patrick O., Alizadeh, Ash A.

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Genome-wide analysis of DNA copy-number changes using cDNA microarrays von Brown, Patrick O, Pollack, Jonathan R, Perou, Charles M, Alizadeh, Ash A, Eisen, Michael B, Pergamenschikov, Alexander, Williams, Cheryl F, Jeffrey, Stefanie S, Botstein, David

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Diversity of Intratumoral Regulatory T Cells in Non-Hodgkin Lymphoma von Spasevska, Ivana, Sharma, Ankush, Steen, Chloe B., Josefsson, Sarah, Blaker, Yngvild Nuvin, Rustad, Even H, Meyer, Saskia, Chellappa, Stalin, Kushekhar, Kushi, Kolstad, Arne, Beiske, Klaus, Holte, Harald, Østenstad, Bjørn, Kimby, Eva, Olweus, Johanna, Tasken, Kjetil, Lorenz, Suzanne, Smeland, Erlend B., Alizadeh, Ash A., Huse, Kanutte, Myklebust, June Helen

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Relation of gene expression phenotype to immunoglobulin mutation genotype in B cell chronic lymphocytic leukemia von Rosenwald, A, Alizadeh, A A, Widhopf, G, Simon, R, Davis, R E, Yu, X, Yang, L, Pickeral, O K, Rassenti, L Z, Powell, J, Botstein, D, Byrd, J C, Grever, M R, Cheson, B D, Chiorazzi, N, Wilson, W H, Kipps, T J, Brown, P O, Staudt, L M

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Stereotyped and Specific Gene Expression Programs in Human Innate Immune Responses to Bacteria von Boldrick, Jennifer C., Alizadeh, Ash A., Diehn, Maximilian, Dudoit, Sandrine, Liu, Chih Long, Belcher, Christopher E., Botstein, David, Staudt, Louis M., Brown, Patrick O., Relman, David A.

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Role of interleukin 6 in myocardial dysfunction of meningococcal septic shock von Pathan, Nazima, Hemingway, Cheryl A, Alizadeh, Ash A, Stephens, Alick C, Boldrick, Jennifer C, Oragui, Emmanuelle E, McCabe, Colm, Welch, Steven B, Whitney, Adeline, O'Gara, Peter, Nadel, Simon, Relman, David A, Harding, Sian E, Levin, Michael

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Genomic Expression Programs and the Integration of the CD28 Costimulatory Signal in T Cell Activation von Diehn, Maximilian, Alizadeh, Ash A., Rando, Oliver J., Liu, Chih Long, Stankunas, Kryn, Botstein, David, Crabtree, Gerald R., Brown, Patrick O.

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The effect of 6 weeks of high intensity interval training (HIIT) with nano-curcumin supplementation on factors related to cardiovascular disease in inactive overweight girls von Fakhri F, Shakeryan S, Fakhri S, Alizadeh AA

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Towards a novel classification of human malignancies based on gene expression patterns von Alizadeh, Ash A., Ross, Douglas T., Perou, Charles M., van de Rijn, Matt

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Abstract PD5-12: Spatial mapping of the immune microenvironment in primary triple-negative breast cancer (TNBC) and association with neoadjuvant therapy response von Telli, ML, Vinayak, S, Khododoust, MS, Gruber, JJ, Ford, JM, Sanchez, P, Banayan, N, Azimi, S, Tumeh, PC, Newman, AM, Alizadeh, AA

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Transformation of Follicular Lymphoma to Diffuse Large-Cell Lymphoma: Alternative Patterns with Increased or Decreased Expression of c-myc and Its Regulated Genes von Lossos, Izidore S., Alizadeh, Ash A., Diehn, Maximilian, Warnke, Roger, Thorstenson, Yvonne, Oefner, Peter J., Brown, Patrick O., Botstein, David, Levy, Ronald

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BDNF and orexin-A response to aerobic exercise are moderated by the meal consumption before exercise in overweight men: Effect of high-carbohydrate, high-protein and high-fat meals von Mardaniyan Ghahfarrokhi, M., Habibi, A., Alizadeh, A.A., Negaresh, R., Mohammad Shahi, M., Earnest, C.P.

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Transformation of follicular lymphoma to diffuse large cell lymphoma is associated with a heterogeneous set of DNA copy number and gene expression alterations von Martinez-Climent, Jose A., Alizadeh, Ash A., Segraves, Richard, Blesa, David, Rubio-Moscardo, Fanny, Albertson, Donna G., Garcia-Conde, Javier, Dyer, Martin J.S., Levy, Ronald, Pinkel, Daniel, Lossos, Izidore S.

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The t(14;18) defines a unique subset of diffuse large B-cell lymphoma with a germinal center B-cell gene expression profile von Huang, James Z., Sanger, Warren G., Greiner, Timothy C., Staudt, Louis M., Weisenburger, Dennis D., Pickering, Diane L., Lynch, James C., Armitage, James O., Warnke, Roger A., Alizadeh, Ash A., Lossos, Izidore S., Levy, Ronald, Chan, Wing C.

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Diversity of intratumoral regulatory T cells in B-cell non-Hodgkin lymphoma von Spasevska, Ivana, Sharma, Ankush, Steen, Chloé B, Josefsson, Sarah E, Blaker, Yngvild N, Kolstad, Arne, Rustad, Even H, Meyer, Saskia, Isaksen, Kathrine, Chellappa, Stalin, Kushekhar, Kushi, Beiske, Klaus, Førsund, Mette S, Spetalen, Signe, Holte, Harald, Østenstad, Bjørn, Brodtkorb, Marianne, Kimby, Eva, Olweus, Johanna, Taskén, Kjetil, Newman, Aaron M, Lorenz, Susanne, Smeland, Erlend B, Alizadeh, Ash A, Huse, Kanutte, Myklebust, June H

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Fludarabine treatment of patients with chronic lymphocytic leukemia induces a p53-dependent gene expression response von Rosenwald, Andreas, Chuang, Eric Y., Davis, R. Eric, Wiestner, Adrian, Alizadeh, Ash A., Arthur, Diane C., Mitchell, James B., Marti, Gerald E., Fowler, Daniel H., Wilson, Wyndham H., Staudt, Louis M.

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