Subtype-specific mutation of PPP2R1A in endometrial and ovarian carcinomas von McConechy, Melissa K, Anglesio, Michael S, Kalloger, Steve E, Yang, Winnie, Senz, Janine, Chow, Christine, Heravi-Moussavi, Alireza, Morin, Gregg B, Mes-Masson, Anne-Marie, Carey, Mark S, McAlpine, Jessica N, Kwon, Janice S, Prentice, Leah M, Boyd, Niki, Shah, Sohrab P, Gilks, C. Blake, Huntsman, David G

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Characterization of the human thyroid epigenome von Siu, Celia, Wiseman, Sam, Gakkhar, Sitanshu, Heravi-Moussavi, Alireza, Bilenky, Misha, Carles, Annaick, Sierocinski, Thomas, Tam, Angela, Zhao, Eric, Kasaian, Katayoon, Moore, Richard A, Mungall, Andrew J, Walker, Blair, Thomson, Thomas, Marra, Marco A, Hirst, Martin, Jones, Steven J M

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deFuse: an algorithm for gene fusion discovery in tumor RNA-Seq data von McPherson, Andrew, Hormozdiari, Fereydoun, Zayed, Abdalnasser, Giuliany, Ryan, Ha, Gavin, Sun, Mark G F, Griffith, Malachi, Heravi Moussavi, Alireza, Senz, Janine, Melnyk, Nataliya, Pacheco, Marina, Marra, Marco A, Hirst, Martin, Nielsen, Torsten O, Sahinalp, S Cenk, Huntsman, David, Shah, Sohrab P

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Micro-ribonucleic acid-155 is a direct target of Meis1, but not a driver in acute myeloid leukemia von Schneider, Edith, Staffas, Anna, Röhner, Linda, Malmberg, Erik D, Ashouri, Arghavan, Krowiorz, Kathrin, Pochert, Nicole, Miller, Christina, Wei, Stella Yuan, Arabanian, Laleh, Buske, Christian, Döhner, Hartmut, Bullinger, Lars, Fogelstrand, Linda, Heuser, Michael, Döhner, Konstanze, Xiang, Ping, Ruschmann, Jens, Petriv, Oleh I, Heravi-Moussavi, Alireza, Hansen, Carl L, Hirst, Martin, Humphries, R Keith, Rouhi, Arefeh, Palmqvist, Lars, Kuchenbauer, Florian

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Analysis of Normal Human Mammary Epigenomes Reveals Cell-Specific Active Enhancer States and Associated Transcription Factor Networks von Pellacani, Davide, Bilenky, Misha, Kannan, Nagarajan, Heravi-Moussavi, Alireza, Knapp, David J.H.F., Gakkhar, Sitanshu, Moksa, Michelle, Carles, Annaick, Moore, Richard, Mungall, Andrew J., Marra, Marco A., Jones, Steven J.M., Aparicio, Samuel, Hirst, Martin, Eaves, Connie J.

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MicroRNA-708 is a novel regulator of the Hoxa9 program in myeloid cells von Schneider, Edith, Pochert, Nicole, Ruess, Christoph, MacPhee, Liam, Escano, Leo, Miller, Christina, Krowiorz, Kathrin, Delsing Malmberg, Erik, Heravi-Moussavi, Alireza, Lorzadeh, Alireza, Ashouri, Arghavan, Grasedieck, Sarah, Sperb, Nadine, Kumar Kopparapu, Pradeep, Iben, Sebastian, Staffas, Anna, Xiang, Ping, Rösler, Reinhild, Kanduri, Meena, Larsson, Erik, Fogelstrand, Linda, Döhner, Hartmut, Döhner, Konstanze, Wiese, Sebastian, Hirst, Martin, Keith Humphries, R., Palmqvist, Lars, Kuchenbauer, Florian, Rouhi, Arefeh

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The specificity of the FOXL2 c.402C>G somatic mutation: a survey of solid tumors von Schrader, Kasmintan A, Gorbatcheva, Bella, Senz, Janine, Heravi-Moussavi, Alireza, Melnyk, Nataliya, Salamanca, Clara, Maines-Bandiera, Sarah, Cooke, Susanna L, Leung, Peter, Brenton, James D, Gilks, C Blake, Monahan, John, Huntsman, David G

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Epithelial-Mesenchymal Plasticity Induced by Discontinuous Exposure to TGFβ1 Promotes Tumour Growth von Santos, Mafalda, Ferreira, Marta, Oliveira, Patrícia, Mendes, Nuno, André, Ana, Vieira, André F., Nunes, Joana B., Carvalho, Joana, Rocha, Sara, Azevedo, Mafalda, Ferreira, Daniel, Reis, Inês, Vinagre, João, Paredes, Joana, Heravi-Moussavi, Alireza, Lima, Jorge, Máximo, Valdemar, Burleigh, Angela, Roskelley, Calvin, Carneiro, Fátima, Huntsman, David, Oliveira, Carla

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Novel candidate genes may be possible predisposing factors revealed by whole exome sequencing in familial esophageal squamous cell carcinoma von Forouzanfar, Narjes, Baranova, Ancha, Milanizadeh, Saman, Heravi-Moussavi, Alireza, Jebelli, Amir, Abbaszadegan, Mohammad Reza

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Integrative analysis of 111 reference human epigenomes von Kundaje, Anshul, Meuleman, Wouter, Ernst, Jason, Bilenky, Misha, Yen, Angela, Heravi-Moussavi, Alireza, Kheradpour, Pouya, Zhang, Zhizhuo, Wang, Jianrong, Ziller, Michael J., Amin, Viren, Whitaker, John W., Schultz, Matthew D., Ward, Lucas D., Sarkar, Abhishek, Quon, Gerald, Sandstrom, Richard S., Eaton, Matthew L., Wu, Yi-Chieh, Pfenning, Andreas R., Wang, Xinchen, Claussnitzer, Melina, Liu, Yaping, Coarfa, Cristian, Harris, R. Alan, Shoresh, Noam, Epstein, Charles B., Gjoneska, Elizabeta, Leung, Danny, Xie, Wei, Hawkins, R. David, Lister, Ryan, Hong, Chibo, Gascard, Philippe, Mungall, Andrew J., Moore, Richard, Chuah, Eric, Tam, Angela, Canfield, Theresa K., Hansen, R. Scott, Kaul, Rajinder, Sabo, Peter J., Bansal, Mukul S., Carles, Annaick, Dixon, Jesse R., Farh, Kai-How, Feizi, Soheil, Karlic, Rosa, Kim, Ah-Ram, Kulkarni, Ashwinikumar, Li, Daofeng, Lowdon, Rebecca, Elliott, GiNell, Mercer, Tim R., Neph, Shane J., Onuchic, Vitor, Polak, Paz, Rajagopal, Nisha, Ray, Pradipta, Sallari, Richard C., Siebenthall, Kyle T., Sinnott-Armstrong, Nicholas A., Stevens, Michael, Thurman, Robert E., Wu, Jie, Zhang, Bo, Zhou, Xin, Beaudet, Arthur E., Boyer, Laurie A., De Jager, Philip L., Farnham, Peggy J., Fisher, Susan J., Haussler, David, Jones, Steven J. M., Li, Wei, Marra, Marco A., McManus, Michael T., Sunyaev, Shamil, Thomson, James A., Tlsty, Thea D., Tsai, Li-Huei, Wang, Wei, Waterland, Robert A., Zhang, Michael Q., Chadwick, Lisa H., Bernstein, Bradley E., Costello, Joseph F., Ecker, Joseph R., Hirst, Martin, Meissner, Alexander, Milosavljevic, Aleksandar, Ren, Bing, Stamatoyannopoulos, John A., Wang, Ting, Kellis, Manolis

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Using next-generation sequencing for the diagnosis of rare disorders: a family with retinitis pigmentosa and skeletal abnormalities von Schrader, Kasmintan A, Heravi-Moussavi, Alireza, Waters, Paula J, Senz, Janine, Whelan, James, Ha, Gavin, Eydoux, Patrice, Nielsen, Torsten, Gallagher, Barry, Oloumi, Arusha, Boyd, Niki, Fernandez, Bridget A, Young, Terry-Lynn, Jones, Steven JM, Hirst, Martin, Shah, Sohrab P, Marra, Marco A, Green, Jane, Huntsman, David G

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The International Human Epigenome Consortium: A Blueprint for Scientific Collaboration and Discovery von Adams, David, Altucci, Lucia, Amit, Ido, Aparicio, Samuel, Arima, Takahiro, Asnafi, Vahid, Bae, Jae-Bum, Bassler, Kevin, Bilenky, Mikhail, Boehm, Bernhard, Bourque, Guillaume, Brors, Benedikt, Bussemakers, Marion J., Chadwick, Lisa, Chen, Wei, Cheung, Tom H., Choi, Nak Hyen, Chung, Ho-Ryun, Clarke, Laura, Dermitzakis, Manolis, Dylag, Tomasz, Eaves, Connie J., Ebert, Peter, Eils, Jürgen, Enver, Tariq, Ferguson-Smith, Anne, Fitzgibbon, Jude, Flicek, Paul, Fraser, Peter, Gasparoni, Nina, Gasparoni, Gilles, Heath, Simon, Helin, Kristian, Hitz, Benjamin C., Horsthemke, Bernhard, Ip, Nancy Y., Ito, Takashi, Jenuwein, Thomas, Joly, Yann, Kanai, Yae, Kang, Hee Gyung, Kiemer, Alexandra K., Kim, Song Cheol, Kim, Bong-Jo, Lehrach, Hans, Leitão, Elsa, Lengauer, Thomas, Lernmark, Åke, Leung, Gilberto K.K., Leung, Danny, Ma, Yussanne, Martin-Subero, Jose Ignacio, Maschke, Karen, Merten, Christoph, Minucci, Saverio, Mitsuyama, Totai, Moore, Richard A., Nordström, Karl, Norstedt, Irene, Ouellette, Francis, Pap, Thomas, Pelicci, Pier Giuseppe, Phillips, Anthony G., Polansky, Julia, Pospisilik, J. Andrew, Prabhakar, Shyam, Procaccini, Dena C., Radbruch, Andreas, Rajewsky, Nikolaus, Rakyan, Vardham, Richardson, David, Rothstein, Mark, Sasaki, Hiroyuki, Sauer, Sascha, Schmidt, Florian, Schultze, Joachim L., Schulyer, Ronald P., Schulz, Marcel, Siebert, Reiner, Sinha, Anupam, Soranzo, Nicole, Spivakov, Mikhail, Steidl, Christian, Suzuki, Narumi, Torrents, David, Tyson, Frederick L., Ullrich, Sebastian, Ushijima, Toshikazu, Valencia, Alfonso, Wallace, Chris, Weber, Stephanie, Weiler, Nina, Weng, Andrew, Wilder, Steven, Yamashita, Yasuhiro, Yap, Desmond Y., Yip, Kevin Y., Yip, Stephen, Zerbino, Daniel, Zipprich, Gideon

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Effect of mastitis during the first lactation on production and reproduction performance of Holstein cows von Heravi Moussavi, Alireza, Danesh Mesgaran, Mohsen, Gilbert, Robert O.

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Effects of conjugated linoleic acids on prostaglandin secretion by bovine endometrial epithelial cells in vitro von Moussavi, Alireza Heravi, Butler, W. Ronald, Bauman, Dale E, Gilbert, Robert O

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A Pan-Cancer Analysis of Alternative Splicing Events Reveals Novel Tumor-Associated Splice Variants of Matriptase von Dargahi, Daryanaz, Swayze, Richard D., Yee, Leanna, Bergqvist, Peter J., Hedberg, Bradley J., Heravi-Moussavi, Alireza, Dullaghan, Edie M., Dercho, Ryan, An, Jianghong, Babcook, John S., Jones, Steven J.M.

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Single-cell analysis of RORα tracer mouse lung reveals ILC progenitors and effector ILC2 subsets von Ghaedi, Maryam, Shen, Zi Yi, Orangi, Mona, Martinez-Gonzalez, Itziar, Wei, Lisa, Lu, Xiaoxiao, Das, Arundhoti, Heravi-Moussavi, Alireza, Marra, Marco A., Bhandoola, Avinash, Takei, Fumio

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The clonal and mutational evolution spectrum of primary triple-negative breast cancers von Shah, Sohrab P., Roth, Andrew, Goya, Rodrigo, Oloumi, Arusha, Ha, Gavin, Zhao, Yongjun, Turashvili, Gulisa, Ding, Jiarui, Tse, Kane, Haffari, Gholamreza, Bashashati, Ali, Prentice, Leah M., Khattra, Jaswinder, Burleigh, Angela, Yap, Damian, Bernard, Virginie, McPherson, Andrew, Shumansky, Karey, Crisan, Anamaria, Giuliany, Ryan, Heravi-Moussavi, Alireza, Rosner, Jamie, Lai, Daniel, Birol, Inanc, Varhol, Richard, Tam, Angela, Dhalla, Noreen, Zeng, Thomas, Ma, Kevin, Chan, Simon K., Griffith, Malachi, Moradian, Annie, Cheng, S.-W. Grace, Morin, Gregg B., Watson, Peter, Gelmon, Karen, Chia, Stephen, Chin, Suet-Feung, Curtis, Christina, Rueda, Oscar M., Pharoah, Paul D., Damaraju, Sambasivarao, Mackey, John, Hoon, Kelly, Harkins, Timothy, Tadigotla, Vasisht, Sigaroudinia, Mahvash, Gascard, Philippe, Tlsty, Thea, Costello, Joseph F., Meyer, Irmtraud M., Eaves, Connie J., Wasserman, Wyeth W., Jones, Steven, Huntsman, David, Hirst, Martin, Caldas, Carlos, Marra, Marco A., Aparicio, Samuel

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ARID1A Mutations in Endometriosis-Associated Ovarian Carcinomas von Wiegand, Kimberly C, Shah, Sohrab P, Al-Agha, Osama M, Zhao, Yongjun, Tse, Kane, Zeng, Thomas, Senz, Janine, McConechy, Melissa K, Anglesio, Michael S, Kalloger, Steve E, Yang, Winnie, Heravi-Moussavi, Alireza, Giuliany, Ryan, Chow, Christine, Fee, John, Zayed, Abdalnasser, Prentice, Leah, Melnyk, Nataliya, Turashvili, Gulisa, Delaney, Allen D, Madore, Jason, Yip, Stephen, McPherson, Andrew W, Ha, Gavin, Bell, Lynda, Fereday, Sian, Tam, Angela, Galletta, Laura, Tonin, Patricia N, Provencher, Diane, Miller, Dianne, Jones, Steven J.M, Moore, Richard A, Morin, Gregg B, Oloumi, Arusha, Boyd, Niki, Aparicio, Samuel A, Shih, Ie-Ming, Mes-Masson, Anne-Marie, Bowtell, David D, Hirst, Martin, Gilks, Blake, Marra, Marco A, Huntsman, David G

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Single-cell analysis of RORα tracer mouse lung reveals ILC progenitors and effector ILC2 subsets von Ghaedi, Maryam, Orangi, Mona, Martinez-Gonzalez, Itziar, Wei, Lisa, Lu, Xiaoxiao, Das, Arundhoti, Heravi-Moussavi, Alireza, Marra, Marco A., Takei, Fumio

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Genome-Wide Profiles of Extra-cranial Malignant Rhabdoid Tumors Reveal Heterogeneity and Dysregulated Developmental Pathways von Chun, Hye-Jung E., Lim, Emilia L., Heravi-Moussavi, Alireza, Saberi, Saeed, Mungall, Karen L., Bilenky, Mikhail, Carles, Annaick, Tse, Kane, Shlafman, Inna, Zhu, Kelsey, Qian, Jenny Q., Palmquist, Diana L., He, An, Long, William, Goya, Rodrigo, Ng, Michelle, LeBlanc, Veronique G., Pleasance, Erin, Thiessen, Nina, Wong, Tina, Chuah, Eric, Zhao, Yong-Jun, Schein, Jacquie E., Gerhard, Daniela S., Taylor, Michael D., Mungall, Andrew J., Moore, Richard A., Ma, Yussanne, Jones, Steven J.M., Perlman, Elizabeth J., Hirst, Martin, Marra, Marco A.

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