Emergence and Selection of a Highly Pathogenic Avian Influenza H7N3 Virus von Beerens, Nancy, Heutink, Rene, Harders, Frank, Bossers, Alex, Koch, Guus, Ben Peeters

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Age Matters: Community Assembly in the Pig Fecal Microbiome in the First Month of Life von Jurburg, Stephanie D., Bossers, Alex

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Multiple Reassorted Viruses as Cause of Highly Pathogenic Avian Influenza A(H5N8) Virus Epidemic, the Netherlands, 2016 von Beerens, Nancy, Heutink, Rene, Bergervoet, Saskia A, Harders, Frank, Bossers, Alex, Koch, Guus

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Farm dust resistomes and bacterial microbiomes in European poultry and pig farms von Luiken, Roosmarijn E.C., Van Gompel, Liese, Bossers, Alex, Munk, Patrick, Joosten, Philip, Hansen, Rasmus Borup, Knudsen, Berith E., García-Cobos, Silvia, Dewulf, Jeroen, Aarestrup, Frank M., Wagenaar, Jaap A., Smit, Lidwien A.M., Mevius, Dik J., Heederik, Dick J.J., Schmitt, Heike

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Novel Highly Pathogenic Avian Influenza A(H5N6) Virus in the Netherlands, December 2017 von Beerens, Nancy, Koch, Guus, Heutink, Rene, Harders, Frank, Vries, D P Edwin, Ho, Cynthia, Bossers, Alex, Elbers, Armin

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Full-Genome Sequence of Influenza A(H5N8) Virus in Poultry Linked to Sequences of Strains from Asia, the Netherlands, 2014 von Bouwstra, Ruth, Heutink, Rene, Bossers, Alex, Harders, Frank, Koch, Guus, Elbers, Armin

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Metagenomics-Based Approach to Source-Attribution of Antimicrobial Resistance Determinants - Identification of Reservoir Resistome Signatures von Duarte, Ana Sofia Ribeiro, Roder, Timo, Van Gompel, Liese, Petersen, Thomas Nordahl, Hansen, Rasmus Borup, Hansen, Inge Marianne, Bossers, Alex, Aarestrup, Frank M., Wagenaar, Jaap A., Hald, Tine

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Genomic evolution of antimicrobial resistance in Escherichia coli von Leekitcharoenphon, Pimlapas, Johansson, Markus Hans Kristofer, Munk, Patrick, Malorny, Burkhard, Skarżyńska, Magdalena, Wadepohl, Katharina, Moyano, Gabriel, Hesp, Ayla, Veldman, Kees T., Bossers, Alex, Zając, Magdalena, Wasyl, Dariusz, Sanders, Pascal, Gonzalez-Zorn, Bruno, Brouwer, Michael S. M., Wagenaar, Jaap A., Heederik, Dick J. J., Mevius, Dik, Aarestrup, Frank M.

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Diet-induced changes in the jejunal microbiota of developing broilers reduce the abundance of Enterococcus hirae and Enterococcus faecium von Stege, Paul B, Schokker, Dirkjan, Harders, Frank, Kar, Soumya K, Stockhofe, Norbert, Perricone, Vera, Rebel, Johanna M J, de Jong, Ingrid C, Bossers, Alex

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Patterns of community assembly in the developing chicken microbiome reveal rapid primary succession von Jurburg, Stephanie D., Brouwer, Michael S. M., Ceccarelli, Daniela, Goot, Jeanet, Jansman, Alfons J. M., Bossers, Alex

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Proof of concept for multiplex detection of antibodies against Chlamydia species in chicken serum using a bead-based suspension array with peptides as antigens von van der Wal, Fimme J, Achterberg, René P, van der Goot, Jeanet A, Dinkla, Annemieke, Bossers-de Vries, Ruth, van Solt-Smits, Conny, Bossers, Alex, Heijne, Marloes

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Description and determinants of the faecal resistome and microbiome of farmers and slaughterhouse workers: A metagenome-wide cross-sectional study von Van Gompel, Liese, Luiken, Roosmarijn E.C., Hansen, Rasmus B., Munk, Patrick, Bouwknegt, Martijn, Heres, Lourens, Greve, Gerdit D., Scherpenisse, Peter, Jongerius-Gortemaker, Betty G.M., Tersteeg-Zijderveld, Monique H.G., García-Cobos, Silvia, Dohmen, Wietske, Dorado-García, Alejandro, Wagenaar, Jaap A., Urlings, Bert A.P., Aarestrup, Frank M., Mevius, Dik J., Heederik, Dick J.J., Schmitt, Heike, Bossers, Alex, Smit, Lidwien A.M.

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Dietary strategies can increase cloacal endotoxin levels and modulate the resident microbiota in broiler chickens von Perricone, Vera, Schokker, Dirkjan, Bossers, Alex, de Bruijn, Anne, Kar, Soumya K., te Pas, Marinus F.W., Rebel, Johanna M.J., Wouters, Inge M., de Jong, Ingrid C.

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Air pollution from livestock farms and the oropharyngeal microbiome of COPD patients and controls von van Kersen, Warner, Bossers, Alex, de Steenhuijsen Piters, Wouter A.A., de Rooij, Myrna M.T., Bonten, Marc, Fluit, Ad C., Heederik, Dick, Paganelli, Fernanda L., Rogers, Malbert, Viveen, Marco, Bogaert, Debby, Leavis, Helen L., Smit, Lidwien A.M.

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Novel Carbapenemases FLC-1 and IMI-2 Encoded by an Enterobacter cloacae Complex Isolated from Food Products von Brouwer, Michael S M, Tehrani, Kamaleddin H M E, Rapallini, Michel, Geurts, Yvon, Kant, Arie, Harders, Frank, Mashayekhi, Vida, Martin, Nathaniel I, Bossers, Alex, Mevius, Dik J, Wit, Ben, Veldman, Kees T

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Phylodynamics of Highly Pathogenic Avian Influenza A(H5N1) Virus Circulating in Indonesian Poultry von Karo-karo, Desniwaty, Bodewes, Rogier, Restuadi, Restuadi, Bossers, Alex, Agustiningsih, Agustiningsih, Stegeman, Jan Arend, Koch, Guus, Muljono, David Handojo

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Circulation of low pathogenic avian influenza (LPAI) viruses in wild birds and poultry in the Netherlands, 2006–2016 von Bergervoet, Saskia A., Pritz-Verschuren, Sylvia B. E., Gonzales, Jose L., Bossers, Alex, Poen, Marjolein J., Dutta, Jayeeta, Khan, Zenab, Kriti, Divya, van Bakel, Harm, Bouwstra, Ruth, Fouchier, Ron A. M., Beerens, Nancy

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Role of the Goat K222-PrPC Polymorphic Variant in Prion Infection Resistance von Aguilar-Calvo, Patricia, Espinosa, Juan Carlos, Pintado, Belen, Gutierrez-Adan, Alfonso, Alamillo, Elia, Miranda, Alberto, Prieto, Irene, Bossers, Alex, Andreoletti, Olivier, Torres, Juan Maria

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Spread of Highly Pathogenic Avian Influenza (HPAI) H5N5 Viruses in Europe in 2016-2017 Appears Related to the Timing of Reassortment Events von Bergervoet, Saskia A, Ho, Cynthia K Y, Heutink, Rene, Bossers, Alex, Beerens, Nancy

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Plasmids of Distinct IncK Lineages Show Compatible Phenotypes von Rozwandowicz, Marta, Brouwer, Michael S M, Zomer, Aldert L, Bossers, Alex, Harders, Frank, Mevius, Dik J, Wagenaar, Jaap A, Hordijk, Joost

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