Systems Approach to Integrative Biology: An Overview of Statistical Methods to Elucidate Association and Architecture von Ciaccio, Mark F, Justin D. Finkle, Albert Y. Xue, Neda Bagheri

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DUETT quantitatively identifies known and novel events in nascent RNA structural dynamics from chemical probing data von Xue, Albert Y, Yu, Angela M, Lucks, Julius B, Bagheri, Neda

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Machine Learning on Signal-to-Noise Ratios Improves Peptide Array Design in SAMDI Mass Spectrometry von Xue, Albert Y, Szymczak, Lindsey C, Mrksich, Milan, Bagheri, Neda

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Inferring causal molecular networks: empirical assessment through a community-based effort von Hill, Steven M, Heiser, Laura M, Cokelaer, Thomas, Unger, Michael, Nesser, Nicole K, Carlin, Daniel E, Zhang, Yang, Sokolov, Artem, Paull, Evan O, Wong, Chris K, Graim, Kiley, Bivol, Adrian, Wang, Haizhou, Zhu, Fan, Afsari, Bahman, Danilova, Ludmila V, Favorov, Alexander V, Lee, Wai Shing, Taylor, Dane, Hu, Chenyue W, Long, Byron L, Noren, David P, Bisberg, Alexander J, Mills, Gordon B, Gray, Joe W, Kellen, Michael, Norman, Thea, Friend, Stephen, Qutub, Amina A, Fertig, Elana J, Guan, Yuanfang, Song, Mingzhou, Stuart, Joshua M, Spellman, Paul T, Koeppl, Heinz, Stolovitzky, Gustavo, Saez-Rodriguez, Julio, Mukherjee, Sach

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DS-ADMM++: A Novel Distributed Quantized ADMM to Speed up Differentially Private Matrix Factorization von Zhang, Feng, Xue, Erkang, Guo, Ruixin, Qu, Guangzhi, Zhao, Gansen, Zomaya, Albert Y.

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Treatment factors affecting outcomes in HIV-associated non-Hodgkin lymphomas: a pooled analysis of 1546 patients von Barta, Stefan K., Xue, Xiaonan, Wang, Dan, Tamari, Roni, Lee, Jeannette Y., Mounier, Nicolas, Kaplan, Lawrence D., Ribera, Josep-Maria, Spina, Michele, Tirelli, Umberto, Weiss, Rudolf, Galicier, Lionel, Boue, Francois, Wilson, Wyndham H., Wyen, Christoph, Oriol, Albert, Navarro, José-Tomás, Dunleavy, Kieron, Little, Richard F., Ratner, Lee, Garcia, Olga, Morgades, Mireia, Remick, Scot C., Noy, Ariela, Sparano, Joseph A.

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Energy-Efficient Deployment of Edge Dataenters for Mobile Clouds in Sustainable IoT von Mishra, Sambit Kumar, Puthal, Deepak, Sahoo, Bibhudatta, Sharma, Suraj, Zhi Xue, Zomaya, Albert Y.

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Reproductive History and Risk of Colorectal Cancer in Postmenopausal Women von ZERVOUDAKIS, Alice, STRICKLER, Howard D, PARK, Yikyung, XIAONAN XUE, HOLLENBECK, Albert, SCHATZKINT, Arthur, GUNTER, Marc J

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Insights into hominid evolution from the gorilla genome sequence von Scally, Aylwyn, Dutheil, Julien Y., Hillier, LaDeana W., Jordan, Gregory E., Goodhead, Ian, Herrero, Javier, Hobolth, Asger, Lappalainen, Tuuli, Mailund, Thomas, Marques-Bonet, Tomas, McCarthy, Shane, Montgomery, Stephen H., Schwalie, Petra C., Tang, Y. Amy, Ward, Michelle C., Xue, Yali, Yngvadottir, Bryndis, Alkan, Can, Andersen, Lars N., Ayub, Qasim, Ball, Edward V., Beal, Kathryn, Bradley, Brenda J., Chen, Yuan, Clee, Chris M., Fitzgerald, Stephen, Graves, Tina A., Gu, Yong, Heath, Paul, Heger, Andreas, Karakoc, Emre, Kolb-Kokocinski, Anja, Laird, Gavin K., Lunter, Gerton, Meader, Stephen, Mort, Matthew, Mullikin, James C., Munch, Kasper, O’Connor, Timothy D., Phillips, Andrew D., Prado-Martinez, Javier, Rogers, Anthony S., Sajjadian, Saba, Schmidt, Dominic, Shaw, Katy, Simpson, Jared T., Stenson, Peter D., Turner, Daniel J., Vigilant, Linda, Vilella, Albert J., Whitener, Weldon, Zhu, Baoli, Cooper, David N., de Jong, Pieter, Dermitzakis, Emmanouil T., Eichler, Evan E., Flicek, Paul, Goldman, Nick, Mundy, Nicholas I., Ning, Zemin, Odom, Duncan T., Ponting, Chris P., Quail, Michael A., Ryder, Oliver A., Searle, Stephen M., Warren, Wesley C., Wilson, Richard K., Schierup, Mikkel H., Rogers, Jane, Tyler-Smith, Chris, Durbin, Richard

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A Comparison of the Polytomous Logistic Regression and Joint Cox Proportional Hazards Models for Evaluating Multiple Disease Subtypes in Prospective Cohort Studies von XIAONAN XUE, KIM, Mimi Y, GAUDET, Mia M, PARK, Yikyung, HEO, Moonseong, HOLLENBECK, Albert R, STRICKLER, Howard D, GUNTER, Marc J

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A global reference for human genetic variation von Auton, Adam, Brooks, Lisa D, Durbin, Richard M, Garrison, Erik P, Kang, Hyun Min, Korbel, Jan O, Marchini, Jonathan L, McCarthy, Shane, McVean, Gil A, Abecasis, Gonçalo R

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A new prognostic score for AIDS-related lymphomas in the rituximab-era von Barta, Stefan K, Xue, Xiaonan, Wang, Dan, Lee, Jeannette Y, Kaplan, Lawrence D, Ribera, Josep-Maria, Oriol, Albert, Spina, Michele, Tirelli, Umberto, Boue, Francois, Wilson, Wyndham H, Wyen, Christoph, Dunleavy, Kieron, Noy, Ariela, Sparano, Joseph A

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Frequency and magnitude variability of Yalu River flooding: numerical analyses for the last 1000 years von Sheng, Hui, Xu, Xiaomei, Gao, Jian Hua, Kettner, Albert J, Shi, Yong, Xue, Chengfeng, Wang, Ya Ping, Gao, Shu

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α-Glucosidase inhibition of natural curcuminoids and curcumin analogs von Du, Zhi-yun, Liu, Rong-rong, Shao, Wei-yan, Mao, Xue-pu, Ma, Lin, Gu, Lian-quan, Huang, Zhi-shu, Chan, Albert S.C.

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Whole-Exome Sequencing Identifies Rare and Low-Frequency Coding Variants Associated with LDL Cholesterol von Lange, Leslie A., Schmidt, Ellen M., Bizon, Chris, Jun, Goo, Auer, Paul, Li, Kuo-ping, Locke, Adam, Rivas, Manuel A., Feitosa, Mary F., Zhang, Qunyuan, Huffman, Jennifer E., Crosby, Jacy, Robinson, Jennifer G., Crosslin, David R., Rosenthal, Elisabeth A., Tsai, Michael, Rieder, Mark J., Fox, Ervin R., van Duijn, Cornelia M., Taylor, Herman A., Loos, Ruth J.F., Ballantyne, Christie M., Reiner, Alexander P., Cupples, L. Adrienne, Kang, Hyun Min, Lettre, Guillaume, Rader, Daniel J., Reilly, Muredach P., Stoletzki, Nina, Barr, R. Graham, Benjamin, Emelia J., Carr, Jeff, Dupuis, Josée, Ellis, Jaclyn, Fornage, Myriam, Goff, David, Grody, Wayne, Heard-Costa, Nancy L., Levy, Daniel, Li, Dalin, Loria, Cay, Mackey, Rachel, Quinlan, Aaron R., Rice, Kenneth, Sanders, Jill P., Tracy, Russell P., Tsai, Michael Y., Wassel, Chrstina L., Watson, Karol, Wilson, Gregory, Wilson, James G., Zakai, Neil A., Nalls, Michael, Bamshad, Michael J., Accurso, Frank, Beaty, Terri, Caplan, Daniel, Chidekel, Aaron, Christiani, David C., De Paula, Alicia, Gutierrez, Hector, Hassoun, Paul M., Hiatt, Peter, Hummer, Laura K., Kim, Yoonhee, Lin, Xihong, Louie, Tin L., Mathias, Rasika A., McNamara, John, McNamara, Sharon, Nielson, Dennis, Orenstein, David, O’Sullivan, Brian, Passero, Mary Ann, Perkett, Elizabeth, Spencer, Terry, Tabor, Holly K., Weiss, Robert, Wigley, Fred, Wise, Robert A., Wurfel, Mark M., Eichler, Evan E., Fu, Wenqing, Smith, Joshua D., Tennessen, Jacob A., Peters, Ulrike, Brzyski, Robert, Curb, J. David, Eaton, Charles B., Heiss, Gerardo, Johnson, Karen C., Lasser, Norman, Lin, Dan-Yu, Logsdon, Benjamin A., Manson, JoAnn E., Martin, Lisa, Stein, Evan, Applebaum-Bowden, Deborah, Paltoo, Dina N., Sturcke, Anne

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PrivGait: An Energy-Harvesting-Based Privacy-Preserving User-Identification System by Gait Analysis von Xu, Weitao, Xue, Wanli, Lin, Qi, Lan, Guohao, Feng, Xingyu, Wei, Bo, Luo, Chengwen, Li, Wei, Zomaya, Albert Y.

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Antigen‐dependent suppression of alloresponses by Foxp3‐induced regulatory T cells in transplantation von Albert, Michael H., Liu, Yan, Anasetti, Claudio, Yu, Xue‐Zhong

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Vaccine effectiveness of BNT162b2 and CoronaVac against SARS-CoV-2 omicron infection and related hospital admission among people with substance use disorder in Hong Kong: a matched... von Huang, Caige, Wei, Yue, Yan, Vincent K C, Ye, Xuxiao, Kang, Wei, Yiu, Hei Hang Edmund, Shami, Jessica J P, Cowling, Benjamin J, Tse, Man Li, Castle, David J, Chui, Celine S L, Lai, Francisco T T, Li, Xue, Wan, Eric Y F, Wong, Carlos K H, Hayes, Joseph F, Chang, Wing Chung, Chung, Albert K K, Lau, Chak Sing, Wong, Ian C K, Chan, Esther W

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Apparent diffusion coefficient histogram analysis stratifies progression-free and overall survival in patients with recurrent GBM treated with bevacizumab: a multi-center study von Pope, Whitney B., Qiao, Xin Joe, Kim, Hyun J., Lai, Albert, Nghiemphu, Phioanh, Xue, Xi, Ellingson, Benjamin M., Schiff, David, Aregawi, Dawit, Cha, Soonmee, Puduvalli, Vinay K., Wu, Jing, Yung, Wai-Kwan A., Young, Geoffrey S., Vredenburgh, James, Barboriak, Dan, Abrey, Lauren E., Mikkelsen, Tom, Jain, Rajan, Paleologos, Nina A., RN, Patricia Lada, Prados, Michael, Goldin, Jonathan, Wen, Patrick Y., Cloughesy, Timothy

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Genome-wide scan of healthy human connectome discovers SPON1 gene variant influencing dementia severity von Jahanshad, Neda, Rajagopalan, Priya, Hua, Xue, Hibar, Derrek P., Nir, Talia M., Toga, Arthur W., Jack, Clifford R., Saykin, Andrew J., Green, Robert C., Weiner, Michael W., Medland, Sarah E., Montgomery, Grant W., Hansell, Narelle K., McMahon, Katie L., de Zubicaray, Greig I., Martin, Nicholas G., Wright, Margaret J., Thompson, Paul M.

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