Inflammatory cytokines and mechanical injury induce post-traumatic osteoarthritis-like changes in a human cartilage-bone-synovium microphysiological system von Dwivedi, Garima, Flaman, Lisa, Alaybeyoglu, Begum, Struglics, André, Frank, Eliot H, Chubinskya, Susan, Trippel, Stephen B, Rosen, Vicki, Cirit, Murat, Grodzinsky, Alan J

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Estimating drug potency in the competitive target mediated drug disposition (TMDD) system when the endogenous ligand is included von Alaybeyoglu, Begum, Cheng, Ho Wa (Jacky), Doshi, Kshama A., Makani, Vishruti, Stein, Andrew M.

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Characterization of the Blood and Cerebrospinal Fluid Microbiome in Children with Bacterial Meningitis and Its Potential Correlation with Inflammation von Liao, Huiping, Zhang, Yuchao, Guo, Wei, Wang, Xi, Wang, Hailong, Ye, Haocheng, Wu, Kai, Zhang, Yu-Hang, Guo, Lingyun, Zhu, Yufei, Guo, Yongli, Hu, Landian, Liu, Gang, Kong, Xiangyin

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Mathematical Modeling of Fluconazole Resistance in the Ergosterol Pathway of Candida albicans von Yu, Paul K, Moron-Espiritu, Llewelyn S, Lao, Angelyn R

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Pathway-Based Similarity Measurement to Quantify Transcriptomics Similarity Between Human Tissues and Preclinical Models von Parekh, Paarth, Sherfey, Jason, Alaybeyoglu, Begum, Cirit, Murat

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FlyOde - a platform for community curation and interactive visualization of dynamic gene regulatory networks in Drosophila eye development [version 1; peer review: 3 approved] von Koestler, Stefan A, Alaybeyoglu, Begum, Weichenberger, Christian X, Celik, Arzu

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Analysis of Membrane Translocation Simulations using Dimensionality Reduction von Alaybeyoglu, Begum, Ozkirimli, Elif

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pVEC hydrophobic N‐terminus is critical for antibacterial activity von Alaybeyoglu, Begum, Sariyar Akbulut, Berna, Ozkirimli, Elif

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The effect of a beta‐lactamase inhibitor peptide on bacterial membrane structure and integrity: a comparative study von Alaybeyoglu, Begum, Uluocak, Bilge Gedik, Akbulut, Berna Sariyar, Ozkirimli, Elif

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A novel chimeric peptide with antimicrobial activity von Alaybeyoglu, Begum, Sariyar Akbulut, Berna, Ozkirimli, Elif

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The effect of a beta-lactamase inhibitor peptide on bacterial membrane structure and integrity: a comparative study: Effects of an Inhibitor Peptide on Bacterial Viability von Alaybeyoglu, Begum, Uluocak, Bilge Gedik, Akbulut, Berna Sariyar, Ozkirimli, Elif

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Toward community standards and software for Whole-Cell Modeling von Waltemath, Dagmar, Krantz, Marcus, Schrieber, Falk

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Response of Escherichia coli to Prolonged Berberine Exposure von Budeyri Gokgoz, Nilay, Avci, Fatma Gizem, Yoneten, Kubra Karaosmanoglu, Alaybeyoglu, Begum, Ozkirimli, Elif, Sayar, Nihat Alpagu, Kazan, Dilek, Sariyar Akbulut, Berna

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Bacterial Uptake of the Cell-Penetrating Peptide pVEC von Alaybeyoglu, Begum, Omur Akdag, Ihsan, Ozkirimli Olmez, Elif

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Effects of dexamethasone and IGF-1 on post-traumatic osteoarthritis-like catabolic changes in a human cartilage-bone-synovium microphysiological system in space and ground control... von Dwivedi, Garima, Flaman, Lisa, Alaybeyoglu, Begum, Frank, Eliot H., Black, Rebecca M., Fite, Jordan, Scherzer, Chris, Barton, Ken, Luyster, Elizabeth, Thomas, Nathan, Boland, Eugene, Krishnan, Yamini, Hung, Han-Hwa, Chubinskaya, Susan, Trippel, Stephen B., Geishecker, Emily, Rosen, Vicki, Önnerfjord, Patrik, Cirit, Murat, Grodzinsky, Alan J.

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Assessment of Drug-Induced Toxicity Biomarkers in the Brain Microphysiological System (MPS) Using Targeted and Untargeted Molecular Profiling von Mina, Sara G, Alaybeyoglu, Begum, Murphy, William L, Thomson, James A, Stokes, Cynthia L, Cirit, Murat

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NEURODEGENERATIVE TARGET DISCOVERY PLATFORM von Alaybeyoglu, Begum, Cirit, Murat, Rumsey, John Wayne, Shin, Yoojin, Sherfey, Jason Samuel

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Neurodegenerative target discovery platform von Alaybeyoglu, Begum, Cirit, Murat, Rumsey, John Wayne, Shin, Yoojin, Sherfey, Jason Samuel

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MICROFLUIDIC PLATFORM FOR TARGET AND BIOMARKER DISCOVERY FOR NON-ALCOHOLIC FATTY LIVER DISEASE von SORENSEN, Nathan Brent, RUMSEY, John Wayne, ALAYBEYOGLU, Begum, CIRIT, Murat

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MICROFLUIDIC PLATFORM FOR TARGET AND BIOMARKER DISCOVERY FOR NON-ALCOHOLIC FATTY LIVER DISEASE von SORENSEN, Nathan Brent, RUMSEY, John Wayne, ALAYBEYOGLU, Begum, CIRIT, Murat

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