A framework for deriving analytic steady states of biochemical reaction networks von Hernandez, Bryan S, Lubenia, Patrick Vincent N, Johnston, Matthew D, Kim, Jae Kyoung

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Efficient Bayesian inference for stochastic agent-based models von Jørgensen, Andreas Christ Sølvsten, Ghosh, Atiyo, Sturrock, Marc, Shahrezaei, Vahid

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Optimal control of agent-based models via surrogate modeling von Fonseca, Luis L., Böttcher, Lucas, Mehrad, Borna, Laubenbacher, Reinhard C.

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Aggregating multiple test results to improve medical decision-making von Böttcher, Lucas, D'Orsogna, Maria R, Chou, Tom

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Deep reinforcement learning for optimal experimental design in biology von Treloar, Neythen J, Braniff, Nathan, Ingalls, Brian, Barnes, Chris P

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Computational optogenetics: empirically-derived voltage- and light-sensitive channelrhodopsin-2 model von Williams, John C, Xu, Jianjin, Lu, Zhongju, Klimas, Aleksandra, Chen, Xuxin, Ambrosi, Christina M, Cohen, Ira S, Entcheva, Emilia

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A model for the intrinsic limit of cancer therapy: Duality of treatment-induced cell death and treatment-induced stemness von Angelini, Erin, Wang, Yue, Zhou, Joseph Xu, Qian, Hong, Huang, Sui

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An Emerging Allee Effect Is Critical for Tumor Initiation and Persistence von Böttger, Katrin, Hatzikirou, Haralambos, Voss-Böhme, Anja, Cavalcanti-Adam, Elisabetta Ada, Herrero, Miguel A, Deutsch, Andreas

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A variational autoencoder trained with priors from canonical pathways increases the interpretability of transcriptome data von Liu, Bin, Rosenhahn, Bodo, Illig, Thomas, DeLuca, David S

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Likelihood-ratio test statistic for the finite-sample case in nonlinear ordinary differential equation models von Tönsing, Christian, Steiert, Bernhard, Timmer, Jens, Kreutz, Clemens

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Design of an adaptable intrafascicular electrode (AIR) for selective nerve stimulation by model-based optimization von Ciotti, Federico, Cimolato, Andrea, Valle, Giacomo, Raspopovic, Stanisa

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HAT: Hypergraph analysis toolbox von Pickard, Joshua, Chen, Can, Salman, Rahmy, Stansbury, Cooper, Kim, Sion, Surana, Amit, Bloch, Anthony, Rajapakse, Indika

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Non-invasive assessment of stroke volume and cardiovascular parameters based on peripheral pressure waveform von Wołos, Kamil, Pstras, Leszek, Debowska, Malgorzata, Dabrowski, Wojciech, Siwicka-Gieroba, Dorota, Poleszczuk, Jan

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RMDGCN: Prediction of RNA methylation and disease associations based on graph convolutional network with attention mechanism von Liu, Lian, Zhou, Yumeng, Lei, Xiujuan

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A kinetic model of iron trafficking in growing Saccharomyces cerevisiae cells; applying mathematical methods to minimize the problem of sparse data and generate viable autoregulato... von Thorat, Shantanu, Walton, Jay R, Lindahl, Paul A

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Identifying a developmental transition in honey bees using gene expression data von Daniels, Bryan C, Wang, Ying, Page, Robert E, Amdam, Gro V

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Stochastic modelling of a three-dimensional glycogen granule synthesis and impact of the branching enzyme von Rousset, Yvan, Ebenhöh, Oliver, Raguin, Adélaïde

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Escherichia coli peptidoglycan structure and mechanics as predicted by atomic-scale simulations von Gumbart, James C, Beeby, Morgan, Jensen, Grant J, Roux, Benoît

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Metabolic modeling of sex-specific liver tissue suggests mechanism of differences in toxicological responses von Moore, Connor J, Holstege, Christopher P, Papin, Jason A

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The biomechanics of chewing and suckling in the infant: A potential mechanism for physiologic metopic suture closure von Haravu, Pranav N, Gonzalez, Miguel, Nathan, Shelby L, Ross, Callum F, Panagiotopoulou, Olga, Reid, Russell R

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