Initial dose of oncolytic myxoma virus programs durable antitumor immunity independent of in vivo viral replication von Flores, Erica B, Aksoy, Bulent A, Bartee, Eric

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Genome-wide inference of natural selection on human transcription factor binding sites von Arbiza, Leonardo, Gronau, Ilan, Aksoy, Bulent A, Hubisz, Melissa J, Gulko, Brad, Keinan, Alon, Siepel, Adam

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Abstract 893: Diffuse gastric adenocarcinoma often harbors KMT2C mutations resulting in malignant phenotypes and worse overall survival von Cho, Soo-Jeong, Yoon, Changhwan, Lee, Jun Ho, Chang, Kevin K., Aksoy, Bulent A., Park, Do Joong, Yoon, Sam S.

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Abstract 4414: RhoA activation in diffuse type gastric adenocarcinoma promotes cancer stem cell phenotypes including chemotherapy resistance von Yoon, Changhwan, Cho, Soo-Jeong, Aksoy, Bulent A., Park, Do Joong, Yoon, Sam S.

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Abstract LB093: Engineering tumor infiltrating lymphocytes from sarcoma and colorectal tumors with membrane bound IL-15 for IL-2 independent expansion and enhanced cytotoxicity aga... von Ao, Zheng, Passaro, Carmela, Aksoy, Bulent A., Koscso, Balazs, Burga, Rachel, Pedro, Kyle, Ly, Natasha, Shah, Nirzari, Ocando, Alonso V., Kulkarni, Gauri, Timpug, Trisha, Pollack, Seth M., ter Meulen, Jan, Ols, Michelle L.

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Integrating biological pathways and genomic profiles with ChiBE 2 von Babur, Özgün, Dogrusoz, Ugur, Çakır, Merve, Aksoy, Bülent Arman, Schultz, Nikolaus, Sander, Chris, Demir, Emek

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Cytokit: a single-cell analysis toolkit for high dimensional fluorescent microscopy imaging von Czech, Eric, Aksoy, Bulent Arman, Aksoy, Pinar, Hammerbacher, Jeff

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Emerging landscape of oncogenic signatures across human cancers von Ciriello, Giovanni, Miller, Martin L, Aksoy, Bülent Arman, Senbabaoglu, Yasin, Schultz, Nikolaus, Sander, Chris

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KMT2C Mutations in Diffuse-Type Gastric Adenocarcinoma Promote Epithelial-to-Mesenchymal Transition von Cho, Soo-Jeong, Yoon, Changhwan, Lee, Jun Ho, Chang, Kevin K, Lin, Jian-Xian, Kim, Young-Ho, Kook, Myeong-Cherl, Aksoy, Bülent Arman, Park, Do Joong, Ashktorab, Hassan, Smoot, Duane T, Schultz, Nikolaus, Yoon, Sam S

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Pathway Commons 2019 Update: integration, analysis and exploration of pathway data von Rodchenkov, Igor, Babur, Ozgun, Luna, Augustin, Aksoy, Bulent Arman, Wong, Jeffrey V, Fong, Dylan, Franz, Max, Siper, Metin Can, Cheung, Manfred, Wrana, Michael, Mistry, Harsh, Mosier, Logan, Dlin, Jonah, Wen, Qizhi, O’Callaghan, Caitlin, Li, Wanxin, Elder, Geoffrey, Smith, Peter T, Dallago, Christian, Cerami, Ethan, Gross, Benjamin, Dogrusoz, Ugur, Demir, Emek, Bader, Gary D, Sander, Chris

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Contribution of systemic and somatic factors to clinical response and resistance to PD-L1 blockade in urothelial cancer: An exploratory multi-omic analysis von Snyder, Alexandra, Nathanson, Tavi, Funt, Samuel A, Ahuja, Arun, Buros Novik, Jacqueline, Hellmann, Matthew D, Chang, Eliza, Aksoy, Bulent Arman, Al-Ahmadie, Hikmat, Yusko, Erik, Vignali, Marissa, Benzeno, Sharon, Boyd, Mariel, Moran, Meredith, Iyer, Gopa, Robins, Harlan S, Mardis, Elaine R, Merghoub, Taha, Hammerbacher, Jeff, Rosenberg, Jonathan E, Bajorin, Dean F

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Systematic identification of cancer driving signaling pathways based on mutual exclusivity of genomic alterations von Babur, Özgün, Gönen, Mithat, Aksoy, Bülent Arman, Schultz, Nikolaus, Ciriello, Giovanni, Sander, Chris, Demir, Emek

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Determination of map literacy of undergraduate geography students von AKSOY, Bülent

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Integrative analysis of complex cancer genomics and clinical profiles using the cBioPortal von Gao, Jianjiong, Aksoy, Bülent Arman, Dogrusoz, Ugur, Dresdner, Gideon, Gross, Benjamin, Sumer, S Onur, Sun, Yichao, Jacobsen, Anders, Sinha, Rileen, Larsson, Erik, Cerami, Ethan, Sander, Chris, Schultz, Nikolaus

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Depression, anxiety and cardiometabolic risk in polycystic ovary syndrome von Cinar, Nese, Kizilarslanoglu, Muhammed Cemal, Harmanci, Ayla, Aksoy, Duygu Yazgan, Bozdag, Gurkan, Demir, Basaran, Yildiz, Bulent Okan

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The magnitude of gonadotoxicity of chemotherapy drugs on ovarian follicles and granulosa cells varies depending upon the category of the drugs and the type of granulosa cells von Yuksel, Aytac, Bildik, Gamze, Senbabaoglu, Filiz, Akin, Nazli, Arvas, Macit, Unal, Fehmi, Kilic, Yagmur, Karanfil, Isil, Eryılmaz, Baldan, Yilmaz, Pelin, Ozkanbaş, Can, Taskiran, Cagatay, Aksoy, Senai, Guzel, Yılmaz, Balaban, Basak, Ince, Umit, Iwase, Akira, Urman, Bulent, Oktem, Ozgur

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Coral: Clear and Customizable Visualization of Human Kinome Data von Metz, Kathleen S., Deoudes, Erika M., Berginski, Matthew E., Jimenez-Ruiz, Ivan, Aksoy, Bulent Arman, Hammerbacher, Jeff, Gomez, Shawn M., Phanstiel, Douglas H.

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Perturbation biology nominates upstream-downstream drug combinations in RAF inhibitor resistant melanoma cells von Korkut, Anil, Wang, Weiqing, Demir, Emek, Aksoy, Bülent Arman, Jing, Xiaohong, Molinelli, Evan J, Babur, Özgün, Bemis, Debra L, Onur Sumer, Selcuk, Solit, David B, Pratilas, Christine A, Sander, Chris

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Computational Pipeline for the PGV-001 Neoantigen Vaccine Trial von Rubinsteyn, Alex, Kodysh, Julia, Hodes, Isaac, Mondet, Sebastien, Aksoy, Bulent Arman, Finnigan, John P, Bhardwaj, Nina, Hammerbacher, Jeffrey

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Prognostic factors of overall and prostate‐specific antigen‐progression‐free survival in metastatic castration‐resistant prostate cancer patients treated with 177Lu‐PSMA‐617. A sin... von Telli, Tugce, Tuncel, Murat, Karabulut, Erdem, Aksoy, Sercan, Erman, Mustafa, Akdogan, Bulent, Caglar, Meltem

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