Systematic analysis of telomere length and somatic alterations in 31 cancer types von Barthel, Floris P, Wei, Wei, Tang, Ming, Martinez-Ledesma, Emmanuel, Hu, Xin, Amin, Samirkumar B, Akdemir, Kadir C, Seth, Sahil, Song, Xingzhi, Wang, Qianghu, Lichtenberg, Tara, Hu, Jian, Zhang, Jianhua, Zheng, Siyuan, Verhaak, Roel G W

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The postnatal role of Sox9 in cartilage von Henry, Stephen P, Liang, Shoudan, Akdemir, Kadir C, de Crombrugghe, Benoit

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TRIM24 links a non-canonical histone signature to breast cancer von Patel, Dinshaw J, Barton, Michelle Craig, Tsai, Wen-Wei, Wang, Zhanxin, Yiu, Teresa T, Akdemir, Kadir C, Xia, Weiya, Winter, Stefan, Tsai, Cheng-Yu, Shi, Xiaobing, Schwarzer, Dirk, Plunkett, William, Aronow, Bruce, Gozani, Or, Fischle, Wolfgang, Hung, Mien-Chie

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Megabase Length Hypermutation Accompanies Human Structural Variation at 17p11.2 von Beck, Christine R., Carvalho, Claudia M.B., Akdemir, Zeynep C., Sedlazeck, Fritz J., Song, Xiaofei, Meng, Qingchang, Hu, Jianhong, Doddapaneni, Harsha, Chong, Zechen, Chen, Edward S., Thornton, Philip C., Liu, Pengfei, Yuan, Bo, Withers, Marjorie, Jhangiani, Shalini N., Kalra, Divya, Walker, Kimberly, English, Adam C., Han, Yi, Chen, Ken, Muzny, Donna M., Ira, Grzegorz, Shaw, Chad A., Gibbs, Richard A., Hastings, P.J., Lupski, James R.

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Genome-wide profiling reveals stimulus-specific functions of p53 during differentiation and DNA damage of human embryonic stem cells von Akdemir, Kadir C, Jain, Abhinav K, Allton, Kendra, Aronow, Bruce, Xu, Xueping, Cooney, Austin J, Li, Wei, Barton, Michelle Craig

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Bi-allelic Mutations in PKD1L1 Are Associated with Laterality Defects in Humans von Vetrini, Francesco, D’Alessandro, Lisa C.A., Akdemir, Zeynep C., Braxton, Alicia, Azamian, Mahshid S., Eldomery, Mohammad K., Miller, Kathryn, Kois, Chelsea, Sack, Virginia, Shur, Natasha, Rijhsinghani, Asha, Chandarana, Jignesh, Ding, Yan, Holtzman, Judy, Jhangiani, Shalini N., Muzny, Donna M., Gibbs, Richard A., Eng, Christine M., Hanchard, Neil A., Harel, Tamar, Rosenfeld, Jill A., Belmont, John W., Lupski, James R., Yang, Yaping

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Systematic Epigenomic Analysis Reveals Chromatin States Associated with Melanoma Progression von Fiziev, Petko, Akdemir, Kadir C., Miller, John P., Keung, Emily Z., Samant, Neha S., Sharma, Sneha, Natale, Christopher A., Terranova, Christopher J., Maitituoheti, Mayinuer, Amin, Samirkumar B., Martinez-Ledesma, Emmanuel, Dhamdhere, Mayura, Axelrad, Jacob B., Shah, Amiksha, Cheng, Christine S., Mahadeshwar, Harshad, Seth, Sahil, Barton, Michelle C., Protopopov, Alexei, Tsai, Kenneth Y., Davies, Michael A., Garcia, Benjamin A., Amit, Ido, Chin, Lynda, Ernst, Jason, Rai, Kunal

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Truncating PREX2 mutations activate its GEF activity and alter gene expression regulation in NRAS-mutant melanoma von Deribe, Yonathan Lissanu, Shi, Yanxia, Rai, Kunal, Nezi, Luigi, Amin, Samir B., Wu, Chia-Chin, Akdemir, Kadir C., Mahdavi, Mozhdeh, Peng, Qian, Chang, Qing Edward, Hornigold, Kirsti, Arold, Stefan T., Welch, Heidi C. E., Garraway, Levi A., Chin, Lynda

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Whole-exome sequencing identifies novel homozygous mutation in  NPAS2 in family with nonobstructive azoospermia von Ramasamy, Ranjith, M.D, Bakırcıoğlu, M. Emre, M.D, Cengiz, Cenk, B.S, Karaca, Ender, M.D, Scovell, Jason, B.S, Jhangiani, Shalini N., M.S, Akdemir, Zeynep C., Ph.D, Bainbridge, Matthew, Ph.D, Yu, Yao, Ph.D, Huff, Chad, Ph.D, Gibbs, Richard A., Ph.D, Lupski, James R., M.D., Ph.D, Lamb, Dolores J., Ph.D

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De Novo GMNN Mutations Cause Autosomal-Dominant Primordial Dwarfism Associated with Meier-Gorlin Syndrome von Burrage, Lindsay C., Charng, Wu-Lin, Eldomery, Mohammad K., Willer, Jason R., Davis, Erica E., Lugtenberg, Dorien, Zhu, Wenmiao, Leduc, Magalie S., Akdemir, Zeynep C., Azamian, Mahshid, Zapata, Gladys, Hernandez, Patricia P., Schoots, Jeroen, de Munnik, Sonja A., Roepman, Ronald, Pearring, Jillian N., Jhangiani, Shalini, Katsanis, Nicholas, Vissers, Lisenka E.L.M., Brunner, Han G., Beaudet, Arthur L., Rosenfeld, Jill A., Muzny, Donna M., Gibbs, Richard A., Eng, Christine M., Xia, Fan, Lalani, Seema R., Lupski, James R., Bongers, Ernie M.H.F., Yang, Yaping

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Novel pathogenic genomic variants leading to autosomal dominant and recessive Robinow syndrome von Zhang, Chaofan, Mazzeu, Juliana F., Eisfeldt, Jesper, Grochowski, Christopher M., White, Janson, Akdemir, Zeynep C., Jhangiani, Shalini N., Muzny, Donna M., Gibbs, Richard A., Lindstrand, Anna, Lupski, James R., Sutton, V. Reid, Carvalho, Claudia M. B.

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LncPRESS1 Is a p53-Regulated LncRNA that Safeguards Pluripotency by Disrupting SIRT6-Mediated De-acetylation of Histone H3K56 von Jain, Abhinav K., Xi, Yuanxin, McCarthy, Ryan, Allton, Kendra, Akdemir, Kadir C., Patel, Lalit R., Aronow, Bruce, Lin, Chunru, Li, Wei, Yang, Liuqing, Barton, Michelle C.

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Structural variants drive context-dependent oncogene activation in cancer von Xu, Zhichao, Lee, Dong-Sung, Chandran, Sahaana, Le, Victoria T., Bump, Rosalind, Yasis, Jean, Dallarda, Sofia, Marcotte, Samantha, Clock, Benjamin, Haghani, Nicholas, Cho, Chae Yun, Akdemir, Kadir C., Tyndale, Selene, Futreal, P. Andrew, McVicker, Graham, Wahl, Geoffrey M., Dixon, Jesse R.

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Pan-cancer landscape of AID-related mutations, composite mutations, and their potential role in the ICI response von Hernández-Verdin, Isaias, Akdemir, Kadir C., Ramazzotti, Daniele, Caravagna, Giulio, Labreche, Karim, Mokhtari, Karima, Hoang-Xuan, Khê, Peyre, Matthieu, Bielle, Franck, Touat, Mehdi, Idbaih, Ahmed, Duval, Alex, Sanson, Marc, Alentorn, Agustí

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Biallelic CACNA2D2 variants in epileptic encephalopathy and cerebellar atrophy von Punetha, Jaya, Karaca, Ender, Gezdirici, Alper, Lamont, Ryan E., Pehlivan, Davut, Marafi, Dana, Appendino, Juan P., Hunter, Jill V., Akdemir, Zeynep C., Fatih, Jawid M., Jhangiani, Shalini N., Gibbs, Richard A., Innes, A. Micheil, Posey, Jennifer E., Lupski, James R.

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Biallelic GRM7 variants cause epilepsy, microcephaly, and cerebral atrophy von Marafi, Dana, Mitani, Tadahiro, Isikay, Sedat, Hertecant, Jozef, Almannai, Mohammed, Manickam, Kandamurugu, Abou Jamra, Rami, El‐Hattab, Ayman W., Rajah, Jaishen, Fatih, Jawid M., Du, Haowei, Karaca, Ender, Bayram, Yavuz, Punetha, Jaya, Rosenfeld, Jill A., Jhangiani, Shalini N., Boerwinkle, Eric, Akdemir, Zeynep C., Erdin, Serkan, Hunter, Jill V., Gibbs, Richard A., Pehlivan, Davut, Posey, Jennifer E., Lupski, James R.

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Somatic mutation distributions in cancer genomes vary with three-dimensional chromatin structure von Akdemir, Kadir C., Le, Victoria T., Kim, Justin M., Killcoyne, Sarah, King, Devin A., Lin, Ya-Ping, Tian, Yanyan, Inoue, Akira, Amin, Samirkumar B., Robinson, Frederick S., Nimmakayalu, Manjunath, Herrera, Rafael E., Lynn, Erica J., Chan, Kin, Seth, Sahil, Klimczak, Leszek J., Gerstung, Moritz, Gordenin, Dmitry A., O’Brien, John, Li, Lei, Deribe, Yonathan Lissanu, Verhaak, Roel G., Campbell, Peter J., Fitzgerald, Rebecca, Morrison, Ashby J., Dixon, Jesse R., Andrew Futreal, P.

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Comparison of anti-VEGF results between non-ischemic branch retinal vein occlusion and ischemic branch retinal vein occlusion with early sector panretinal photocoagulation von Akdemir, S.C., Gunay, B.O.

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Direct activation of forkhead box O3 by tumor suppressors p53 and p73 is disrupted during liver regeneration in mice von Kurinna, Svitlana, Stratton, Sabrina A., Tsai, Wen‐Wei, Akdemir, Kadir C., Gu, Weisong, Singh, Pallavi, Goode, Triona, Darlington, Gretchen J., Barton, Michelle Craig

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Homozygous and hemizygous CNV detection from exome sequencing data in a Mendelian disease cohort von Gambin, Tomasz, Akdemir, Zeynep C, Yuan, Bo, Gu, Shen, Chiang, Theodore, Carvalho, Claudia M B, Shaw, Chad, Jhangiani, Shalini, Boone, Philip M, Eldomery, Mohammad K, Karaca, Ender, Bayram, Yavuz, Stray-Pedersen, Asbjørg, Muzny, Donna, Charng, Wu-Lin, Bahrambeigi, Vahid, Belmont, John W, Boerwinkle, Eric, Beaudet, Arthur L, Gibbs, Richard A, Lupski, James R

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