Enhanced Integrated Gradients: improving interpretability of deep learning models using splicing codes as a case study von Jha, Anupama, Aicher, Joseph K., Gazzara, Matthew R., Singh, Deependra, Barash, Yoseph

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RNA splicing analysis using heterogeneous and large RNA-seq datasets von Vaquero-Garcia, Jorge, Aicher, Joseph K., Jewell, San, Gazzara, Matthew R., Radens, Caleb M., Jha, Anupama, Norton, Scott S., Lahens, Nicholas F., Grant, Gregory R., Barash, Yoseph

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Random Forest Analysis of Untargeted Metabolomics Data Suggests Increased Use of Omega Fatty Acid Oxidation Pathway in Drosophila Melanogaster Larvae Fed a Medium Chain Fatty Acid... von Oza, Vishal H, Aicher, Joseph K, Reed, Laura K

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Mapping RNA splicing variations in clinically accessible and nonaccessible tissues to facilitate Mendelian disease diagnosis using RNA-seq von Aicher, Joseph K., Jewell, Paul, Vaquero-Garcia, Jorge, Barash, Yoseph, Bhoj, Elizabeth J.

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ChromoShake: a chromosome dynamics simulator reveals that chromatin loops stiffen centromeric chromatin von Lawrimore, Josh, Aicher, Joseph K, Hahn, Patrick, Fulp, Alyona, Kompa, Ben, Vicci, Leandra, Falvo, Michael, Taylor, 2nd, Russell M, Bloom, Kerry

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Mapping RNA splicing variations in clinically-accessible and non-accessible tissues to facilitate Mendelian disease diagnosis using RNA-seq von Aicher, Joseph K, Jewell, Paul, Vaquero-Garcia, Jorge, Barash, Yoseph, Bhoj, Elizabeth J

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Variant non-ketotic hyperglycinemia is caused by mutations in LIAS, BOLA3 and the novel gene GLRX5 von BAKER, Peter R, FRIEDERICH, Marisa W, LEE, Wang-Tso, DESHPANDE, Charu, FRECKMANN, Mary-Louise, SHIH, Ling-Yu, WASSERSTEIN, Melissa, RASMUSSEN, Malene B, LUND, Allan M, PROCOPIS, Peter, CAMERON, Jessie M, ROBINSON, Brian H, SWANSON, Michael A, BROWN, Garry K, BROWN, Ruth M, COMPTON, Alison G, DIECKMANN, Carol L, COLLARD, Renata, COUGHLIN, Curtis R, SPECTOR, Elaine, WEMPE, Michael F, VAN HOVE, Johan L. K, SHAIKH, Tamim, BHATTACHARYA, Kaustuv, SCHARER, Gunter H, AICHER, Joseph, CREADON-SWINDELL, Geralyn, GEIGER, Elizabeth, MACLEAN, Kenneth N

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