Statistical Methods for Handling Unwanted Variation in Metabolomics Data von Livera, Alysha M. De, Sysi-Aho, Marko, Jacob, Laurent, Gagnon-Bartsch, Johann A, Castillo, Sandra, Simpson, Julie A, Speed, Terence P

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Normalization method for metabolomics data using optimal selection of multiple internal standards von Sysi-Aho, Marko, Katajamaa, Mikko, Yetukuri, Laxman, Oresic, Matej

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Circulating Ceramides Predict Cardiovascular Outcomes in the Population-Based FINRISK 2002 Cohort von Havulinna, Aki S, Sysi-Aho, Marko, Hilvo, Mika, Kauhanen, Dimple, Hurme, Reini, Ekroos, Kim, Salomaa, Veikko, Laaksonen, Reijo

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Estimating Linear and Nonlinear Gene Coexpression Networks by Semiparametric Neighborhood Selection von Kontio, Juho A J, Rinta-aho, Marko J, Sillanpää, Mikko J

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Stochastic search variable selection based on two mixture components and continuous‐scale weighting von Rinta‐aho, Marko J., Sillanpää, Mikko J.

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Development and validation of a high-throughput LC–MS/MS assay for routine measurement of molecular ceramides von Kauhanen, Dimple, Sysi-Aho, Marko, Koistinen, Kaisa M., Laaksonen, Reijo, Sinisalo, Juha, Ekroos, Kim

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Gender, Contraceptives and Individual Metabolic Predisposition Shape a Healthy Plasma Lipidome von Sales, Susanne, Graessler, Juergen, Ciucci, Sara, Al-Atrib, Rania, Vihervaara, Terhi, Schuhmann, Kai, Kauhanen, Dimple, Sysi-Aho, Marko, Bornstein, Stefan R., Bickle, Marc, Cannistraci, Carlo V., Ekroos, Kim, Shevchenko, Andrej

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Novel Theranostic Opportunities Offered by Characterization of Altered Membrane Lipid Metabolism in Breast Cancer Progression von HILVO, Mika, DENKERT, Carsten, BERG, Emilia, NYGREN, Heli, SYSI-AHO, Marko, GRIFFIN, Julian L, FIEHN, Oliver, LOIBL, Sibylle, RICHTER-EHRENSTEIN, Christiane, RADKE, Cornelia, HYÖTYLÄINEN, Tuulia, KALLIONIEMI, Olli, LEHTINEN, Laura, ILJIN, Kristiina, ORESIC, Matej, MÜLLE, Berit, BROCKRNÖLLE, Scarlet, SEPPÄNEN-LAAKSO, Tuulikki, BUDCZIES, Jan, BUCHET, Elmar, YETUKURI, Laxman, CASTILLO, Sandra

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Plasma concentrations of molecular lipid species in relation to coronary plaque characteristics and cardiovascular outcome: Results of the ATHEROREMO-IVUS study von Cheng, Jin M, Suoniemi, Matti, Kardys, Isabella, Vihervaara, Terhi, de Boer, Sanneke P.M, Akkerhuis, K. Martijn, Sysi-Aho, Marko, Ekroos, Kim, Garcia-Garcia, Hector M, Oemrawsingh, Rohit M, Regar, Evelyn, Koenig, Wolfgang, Serruys, Patrick W, van Geuns, Robert-Jan, Boersma, Eric, Laaksonen, Reijo

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Monounsaturated fatty acids in serum triacylglycerols are associated with response to neoadjuvant chemotherapy in breast cancer patients von Hilvo, Mika, Gade, Stephan, Hyötyläinen, Tuulia, Nekljudova, Valentina, Seppänen‐Laakso, Tuulikki, Sysi‐Aho, Marko, Untch, Michael, Huober, Jens, Minckwitz, Gunter, Denkert, Carsten, Orešič, Matej, Loibl, Sibylle

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RNA-Seq and Mass-Spectrometry-Based Lipidomics Reveal Extensive Changes of Glycerolipid Pathways in Brown Adipose Tissue in Response to Cold von Marcher, Ann-Britt, Loft, Anne, Nielsen, Ronni, Vihervaara, Terhi, Madsen, Jesper Grud Skat, Sysi-Aho, Marko, Ekroos, Kim, Mandrup, Susanne

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Acquired obesity is associated with changes in the serum lipidomic profile independent of genetic effects--a monozygotic twin study von Pietiläinen, Kirsi H, Sysi-Aho, Marko, Rissanen, Aila, Seppänen-Laakso, Tuulikki, Yki-Järvinen, Hannele, Kaprio, Jaakko, Oresic, Matej

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Bioinformatics and computational methods for lipidomics von Niemelä, Perttu S., Castillo, Sandra, Sysi-Aho, Marko, Orešič, Matej

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Dysregulation of lipid and amino acid metabolism precedes islet autoimmunity in children who later progress to type 1 diabetes von Oresic, Matej, Simell, Satu, Sysi-Aho, Marko, Näntö-Salonen, Kirsti, Seppänen-Laakso, Tuulikki, Parikka, Vilhelmiina, Katajamaa, Mikko, Hekkala, Anne, Mattila, Ismo, Keskinen, Päivi, Yetukuri, Laxman, Reinikainen, Arja, Lähde, Jyrki, Suortti, Tapani, Hakalax, Jari, Simell, Tuula, Hyöty, Heikki, Veijola, Riitta, Ilonen, Jorma, Lahesmaa, Riitta, Knip, Mikael, Simell, Olli

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COordination of Standards in MetabOlomicS (COSMOS): facilitating integrated metabolomics data access von Salek, Reza M., Neumann, Steffen, Schober, Daniel, Hummel, Jan, Billiau, Kenny, Kopka, Joachim, Correa, Elon, Reijmers, Theo, Rosato, Antonio, Tenori, Leonardo, Turano, Paola, Marin, Silvia, Deborde, Catherine, Jacob, Daniel, Rolin, Dominique, Dartigues, Benjamin, Conesa, Pablo, Haug, Kenneth, Rocca-Serra, Philippe, O’Hagan, Steve, Hao, Jie, van Vliet, Michael, Sysi-Aho, Marko, Ludwig, Christian, Bouwman, Jildau, Cascante, Marta, Ebbels, Timothy, Griffin, Julian L., Moing, Annick, Nikolski, Macha, Oresic, Matej, Sansone, Susanna-Assunta, Viant, Mark R., Goodacre, Royston, Günther, Ulrich L., Hankemeier, Thomas, Luchinat, Claudio, Walther, Dirk, Steinbeck, Christoph

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Gender‐dependent progression of systemic metabolic states in early childhood von Nikkilä, Janne, Sysi‐Aho, Marko, Ermolov, Andrey, Seppänen‐Laakso, Tuulikki, Simell, Olli, Kaski, Samuel, Orešič, Matej

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A systems biology strategy reveals biological pathways and plasma biomarker candidates for potentially toxic statin-induced changes in muscle von Laaksonen, Reijo, Katajamaa, Mikko, Päivä, Hannu, Sysi-Aho, Marko, Saarinen, Lilli, Junni, Päivi, Lütjohann, Dieter, Smet, Joél, Van Coster, Rudy, Seppänen-Laakso, Tuulikki, Lehtimäki, Terho, Soini, Juhani, Oresic, Matej

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Metabolic regulation in progression to autoimmune diabetes von Sysi-Aho, Marko, Ermolov, Andrey, Gopalacharyulu, Peddinti V, Tripathi, Abhishek, Seppänen-Laakso, Tuulikki, Maukonen, Johanna, Mattila, Ismo, Ruohonen, Suvi T, Vähätalo, Laura, Yetukuri, Laxman, Härkönen, Taina, Lindfors, Erno, Nikkilä, Janne, Ilonen, Jorma, Simell, Olli, Saarela, Maria, Knip, Mikael, Kaski, Samuel, Savontaus, Eriika, Orešič, Matej

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Metabolome in schizophrenia and other psychotic disorders: a general population-based study von Orešič, Matej, Tang, Jing, Seppänen-Laakso, Tuulikki, Mattila, Ismo, Saarni, Suoma E, Saarni, Samuli I, Lönnqvist, Jouko, Sysi-Aho, Marko, Hyötyläinen, Tuulia, Perälä, Jonna, Suvisaari, Jaana

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Integrated model of metabolism and autoimmune response in β-cell death and progression to type 1 diabetes von Marinković, Tijana, Sysi-Aho, Marko, Orešič, Matej

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