Social defeat models in animal science: What we have learned from rodent models von Toyoda, Atsushi

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Protein lactylation induced by neural excitation von Hagihara, Hideo, Shoji, Hirotaka, Otabi, Hikari, Toyoda, Atsushi, Katoh, Kaoru, Namihira, Masakazu, Miyakawa, Tsuyoshi

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Nutritional interventions for promoting stress resilience: Recent progress using psychosocial stress models of rodents von Toyoda, Atsushi

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Efficient de novo assembly of highly heterozygous genomes from whole-genome shotgun short reads von Kajitani, Rei, Toshimoto, Kouta, Noguchi, Hideki, Toyoda, Atsushi, Ogura, Yoshitoshi, Okuno, Miki, Yabana, Mitsuru, Harada, Masayuki, Nagayasu, Eiji, Maruyama, Haruhiko, Kohara, Yuji, Fujiyama, Asao, Hayashi, Tetsuya, Itoh, Takehiko

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Platanus-allee is a de novo haplotype assembler enabling a comprehensive access to divergent heterozygous regions von Kajitani, Rei, Yoshimura, Dai, Okuno, Miki, Minakuchi, Yohei, Kagoshima, Hiroshi, Fujiyama, Asao, Kubokawa, Kaoru, Kohara, Yuji, Toyoda, Atsushi, Itoh, Takehiko

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Single-cell RNA-seq analysis reveals penaeid shrimp hemocyte subpopulations and cell differentiation process von Koiwai, Keiichiro, Koyama, Takashi, Tsuda, Soichiro, Toyoda, Atsushi, Kikuchi, Kiyoshi, Suzuki, Hiroaki, Kawano, Ryuji

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A key metabolic gene for recurrent freshwater colonization and radiation in fishes von Ishikawa, Asano, Kabeya, Naoki, Ikeya, Koki, Kakioka, Ryo, Cech, Jennifer N, Osada, Naoki, Leal, Miguel C, Inoue, Jun, Kume, Manabu, Toyoda, Atsushi, Tezuka, Ayumi, Nagano, Atsushi J, Yamasaki, Yo Y, Suzuki, Yuto, Kokita, Tomoyuki, Takahashi, Hiroshi, Lucek, Kay, Marques, David, Takehana, Yusuke, Naruse, Kiyoshi, Mori, Seiichi, Monroig, Oscar, Ladd, Nemiah, Schubert, Carsten J, Matthews, Blake, Peichel, Catherine L, Seehausen, Ole, Yoshizaki, Goro, Kitano, Jun

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Genome sequence and analysis of the Japanese morning glory Ipomoea nil von Hoshino, Atsushi, Jayakumar, Vasanthan, Nitasaka, Eiji, Toyoda, Atsushi, Noguchi, Hideki, Itoh, Takehiko, Shin-I, Tadasu, Minakuchi, Yohei, Koda, Yuki, Nagano, Atsushi J., Yasugi, Masaki, Honjo, Mie N., Kudoh, Hiroshi, Seki, Motoaki, Kamiya, Asako, Shiraki, Toshiyuki, Carninci, Piero, Asamizu, Erika, Nishide, Hiroyo, Tanaka, Sachiko, Park, Kyeung-Il, Morita, Yasumasa, Yokoyama, Kohei, Uchiyama, Ikuo, Tanaka, Yoshikazu, Tabata, Satoshi, Shinozaki, Kazuo, Hayashizaki, Yoshihide, Kohara, Yuji, Suzuki, Yutaka, Sugano, Sumio, Fujiyama, Asao, Iida, Shigeru, Sakakibara, Yasubumi

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Chromosome-level genome assembly of Ophiorrhiza pumila reveals the evolution of camptothecin biosynthesis von Rai, Amit, Hirakawa, Hideki, Nakabayashi, Ryo, Kikuchi, Shinji, Hayashi, Koki, Rai, Megha, Tsugawa, Hiroshi, Nakaya, Taiki, Mori, Tetsuya, Nagasaki, Hideki, Fukushi, Runa, Kusuya, Yoko, Takahashi, Hiroki, Uchiyama, Hiroshi, Toyoda, Atsushi, Hikosaka, Shoko, Goto, Eiji, Saito, Kazuki, Yamazaki, Mami

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Metagenomic and metabolomic analyses reveal distinct stage-specific phenotypes of the gut microbiota in colorectal cancer von Yachida, Shinichi, Mizutani, Sayaka, Shiroma, Hirotsugu, Shiba, Satoshi, Nakajima, Takeshi, Sakamoto, Taku, Watanabe, Hikaru, Masuda, Keigo, Nishimoto, Yuichiro, Kubo, Masaru, Hosoda, Fumie, Rokutan, Hirofumi, Matsumoto, Minori, Takamaru, Hiroyuki, Yamada, Masayoshi, Matsuda, Takahisa, Iwasaki, Motoki, Yamaji, Taiki, Yachida, Tatsuo, Soga, Tomoyoshi, Kurokawa, Ken, Toyoda, Atsushi, Ogura, Yoshitoshi, Hayashi, Tetsuya, Hatakeyama, Masanori, Nakagama, Hitoshi, Saito, Yutaka, Fukuda, Shinji, Shibata, Tatsuhiro, Yamada, Takuji

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Genome editing reveals fitness effects of a gene for sexual dichromatism in Sulawesian fishes von Ansai, Satoshi, Mochida, Koji, Fujimoto, Shingo, Mokodongan, Daniel F., Sumarto, Bayu Kreshna Adhitya, Masengi, Kawilarang W. A., Hadiaty, Renny K., Nagano, Atsushi J., Toyoda, Atsushi, Naruse, Kiyoshi, Yamahira, Kazunori, Kitano, Jun

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Genome evolution in the allotetraploid frog Xenopus laevis von Session, Adam M., Uno, Yoshinobu, Kwon, Taejoon, Chapman, Jarrod A., Toyoda, Atsushi, Takahashi, Shuji, Fukui, Akimasa, Hikosaka, Akira, Suzuki, Atsushi, Kondo, Mariko, van Heeringen, Simon J., Quigley, Ian, Heinz, Sven, Ogino, Hajime, Ochi, Haruki, Hellsten, Uffe, Lyons, Jessica B., Simakov, Oleg, Putnam, Nicholas, Stites, Jonathan, Kuroki, Yoko, Tanaka, Toshiaki, Michiue, Tatsuo, Watanabe, Minoru, Bogdanovic, Ozren, Lister, Ryan, Georgiou, Georgios, Paranjpe, Sarita S., van Kruijsbergen, Ila, Shu, Shengquiang, Carlson, Joseph, Kinoshita, Tsutomu, Ohta, Yuko, Mawaribuchi, Shuuji, Jenkins, Jerry, Grimwood, Jane, Schmutz, Jeremy, Mitros, Therese, Mozaffari, Sahar V., Suzuki, Yutaka, Haramoto, Yoshikazu, Yamamoto, Takamasa S., Takagi, Chiyo, Heald, Rebecca, Miller, Kelly, Haudenschild, Christian, Kitzman, Jacob, Nakayama, Takuya, Izutsu, Yumi, Robert, Jacques, Fortriede, Joshua, Burns, Kevin, Lotay, Vaneet, Karimi, Kamran, Yasuoka, Yuuri, Dichmann, Darwin S., Flajnik, Martin F., Houston, Douglas W., Shendure, Jay, DuPasquier, Louis, Vize, Peter D., Zorn, Aaron M., Ito, Michihiko, Marcotte, Edward M., Wallingford, John B., Ito, Yuzuru, Asashima, Makoto, Ueno, Naoto, Matsuda, Yoichi, Veenstra, Gert Jan C., Fujiyama, Asao, Harland, Richard M., Taira, Masanori, Rokhsar, Daniel S.

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Heat-killed Lactobacillus helveticus strain MCC1848 confers resilience to anxiety or depression-like symptoms caused by subchronic social defeat stress in mice von Maehata, Hazuki, Kobayashi, Yodai, Mitsuyama, Eri, Kawase, Takahiro, Kuhara, Tetsuya, Xiao, Jin-Zhong, Tsukahara, Takamitsu, Toyoda, Atsushi

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The genomic landscape at a late stage of stickleback speciation: High genomic divergence interspersed by small localized regions of introgression von Ravinet, Mark, Yoshida, Kohta, Shigenobu, Shuji, Toyoda, Atsushi, Fujiyama, Asao, Kitano, Jun

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An acid-tolerant ammonia-oxidizing γ-proteobacterium from soil von Hayatsu, Masahito, Tago, Kanako, Uchiyama, Ikuo, Toyoda, Atsushi, Wang, Yong, Shimomura, Yumi, Okubo, Takashi, Kurisu, Futoshi, Hirono, Yuhei, Nonaka, Kunihiko, Akiyama, Hiroko, Itoh, Takehiko, Takami, Hideto

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High-quality genome assembly of the silkworm, Bombyx mori von Kawamoto, Munetaka, Jouraku, Akiya, Toyoda, Atsushi, Yokoi, Kakeru, Minakuchi, Yohei, Katsuma, Susumu, Fujiyama, Asao, Kiuchi, Takashi, Yamamoto, Kimiko, Shimada, Toru

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The Chara Genome: Secondary Complexity and Implications for Plant Terrestrialization von Nishiyama, Tomoaki, Sakayama, Hidetoshi, de Vries, Jan, Buschmann, Henrik, Saint-Marcoux, Denis, Ullrich, Kristian K., Haas, Fabian B., Vanderstraeten, Lisa, Becker, Dirk, Lang, Daniel, Vosolsobě, Stanislav, Rombauts, Stephane, Wilhelmsson, Per K.I., Janitza, Philipp, Kern, Ramona, Heyl, Alexander, Rümpler, Florian, Villalobos, Luz Irina A. Calderón, Clay, John M., Skokan, Roman, Toyoda, Atsushi, Suzuki, Yutaka, Kagoshima, Hiroshi, Schijlen, Elio, Tajeshwar, Navindra, Catarino, Bruno, Hetherington, Alexander J., Saltykova, Assia, Bonnot, Clemence, Breuninger, Holger, Symeonidi, Aikaterini, Radhakrishnan, Guru V., Van Nieuwerburgh, Filip, Deforce, Dieter, Chang, Caren, Karol, Kenneth G., Hedrich, Rainer, Ulvskov, Peter, Glöckner, Gernot, Delwiche, Charles F., Petrášek, Jan, Van de Peer, Yves, Friml, Jiri, Beilby, Mary, Dolan, Liam, Kohara, Yuji, Sugano, Sumio, Fujiyama, Asao, Delaux, Pierre-Marc, Quint, Marcel, Theißen, Günter, Hagemann, Martin, Harholt, Jesper, Dunand, Christophe, Zachgo, Sabine, Langdale, Jane, Maumus, Florian, Van Der Straeten, Dominique, Gould, Sven B., Rensing, Stefan A.

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The RNA helicase DDX6 controls early mouse embryogenesis by repressing aberrant inhibition of BMP signaling through miRNA-mediated gene silencing von Kim, Jessica, Muraoka, Masafumi, Okada, Hajime, Toyoda, Atsushi, Ajima, Rieko, Saga, Yumiko

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FIGNL1 AAA+ ATPase remodels RAD51 and DMC1 filaments in pre-meiotic DNA replication and meiotic recombination von Ito, Masaru, Furukohri, Asako, Matsuzaki, Kenichiro, Fujita, Yurika, Toyoda, Atsushi, Shinohara, Akira

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Extremotolerant tardigrade genome and improved radiotolerance of human cultured cells by tardigrade-unique protein von Hashimoto, Takuma, Horikawa, Daiki D., Saito, Yuki, Kuwahara, Hirokazu, Kozuka-Hata, Hiroko, Shin-I, Tadasu, Minakuchi, Yohei, Ohishi, Kazuko, Motoyama, Ayuko, Aizu, Tomoyuki, Enomoto, Atsushi, Kondo, Koyuki, Tanaka, Sae, Hara, Yuichiro, Koshikawa, Shigeyuki, Sagara, Hiroshi, Miura, Toru, Yokobori, Shin-ichi, Miyagawa, Kiyoshi, Suzuki, Yutaka, Kubo, Takeo, Oyama, Masaaki, Kohara, Yuji, Fujiyama, Asao, Arakawa, Kazuharu, Katayama, Toshiaki, Toyoda, Atsushi, Kunieda, Takekazu

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