Single cell transcriptomic analysis of murine lung development on hyperoxia-induced damage von Hurskainen, Maria, Mižíková, Ivana, Cook, David P., Andersson, Noora, Cyr-Depauw, Chanèle, Lesage, Flore, Helle, Emmi, Renesme, Laurent, Jankov, Robert P., Heikinheimo, Markku, Vanderhyden, Barbara C., Thébaud, Bernard

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The FOXL2 C134W mutation is characteristic of adult granulosa cell tumors of the ovary von Jamieson, Stacey, Butzow, Ralf, Andersson, Noora, Alexiadis, Maria, Unkila-Kallio, Leila, Heikinheimo, Markku, Fuller, Peter J, Anttonen, Mikko

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Hyper-phosphorylation of Sequestosome-1 Distinguishes Resistance to Cisplatin in Patient Derived High Grade Serous Ovarian Cancer Cells von Nguyen, Elizabeth V., Huhtinen, Kaisa, Goo, Young Ah, Kaipio, Katja, Andersson, Noora, Rantanen, Ville, Hynninen, Johanna, Lahesmaa, Riitta, Carpen, Olli, Goodlett, David R.

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BRAF immunohistochemistry predicts sentinel lymph node involvement in intermediate thickness melanomas von Manninen, Atte A, Gardberg, Maria, Juteau, Susanna, Ilmonen, Suvi, Jukonen, Joonas, Andersson, Noora, Carpén, Olli

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FOXL2, GATA4, and SMAD3 co-operatively modulate gene expression, cell viability and apoptosis in ovarian granulosa cell tumor cells von Anttonen, Mikko, Pihlajoki, Marjut, Andersson, Noora, Georges, Adrien, L'hôte, David, Vattulainen, Sanna, Färkkilä, Anniina, Unkila-Kallio, Leila, Veitia, Reiner A, Heikinheimo, Markku

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Analysis of Non-Relapsed and Relapsed Adult Type Granulosa Cell Tumors Suggests Stable Transcriptomes during Tumor Progression von Andersson, Noora, Haltia, Ulla-Maija, Färkkilä, Anniina, Wong, Swee Chong, Eloranta, Katja, Wilson, David B., Unkila-Kallio, Leila, Pihlajoki, Marjut, Kyrönlahti, Antti, Heikinheimo, Markku

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Transcription factor FOXL2 protects granulosa cells from stress and delays cell cycle: role of its regulation by the SIRT1 deacetylase von BENAYOUN, Bérénice A, GEORGES, Adrien B, L'HOTE, David, ANDERSSON, Noora, DIPIETROMARIA, Aurélie, TODESCHINI, Anne-Laure, CABURET, Sandrine, BAZIN, Claude, ANTTONEN, Mikko, VEITIA, Reiner A

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Transcription factor GATA4 associates with mesenchymal-like gene expression in human hepatoblastoma cells von Soini, Tea, Eloranta, Katja, Pihlajoki, Marjut, Kyrönlahti, Antti, Akinrinade, Oyediran, Andersson, Noora, Lohi, Jouko, Pakarinen, Mikko P, Wilson, David B, Heikinheimo, Markku

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Evolving Up‐regulation of Biliary Fibrosis–Related Extracellular Matrix Molecules After Successful Portoenterostomy von Kyrönlahti, Antti, Godbole, Nimish, Akinrinade, Oyediran, Soini, Tea, Nyholm, Iiris, Andersson, Noora, Hukkinen, Maria, Lohi, Jouko, Wilson, David B., Pihlajoki, Marjut, Pakarinen, Mikko P., Heikinheimo, Markku

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Neuropathologic features of four autopsied COVID‐19 patients von Kantonen, Jonas, Mahzabin, Shamita, Mäyränpää, Mikko I., Tynninen, Olli, Paetau, Anders, Andersson, Noora, Sajantila, Antti, Vapalahti, Olli, Carpén, Olli, Kekäläinen, Eliisa, Kantele, Anu, Myllykangas, Liisa

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QuantISH: RNA in situ hybridization image analysis framework for quantifying cell type-specific target RNA expression and variability von Jamalzadeh, Sanaz, Häkkinen, Antti, Andersson, Noora, Huhtinen, Kaisa, Laury, Anna, Hietanen, Sakari, Hynninen, Johanna, Oikkonen, Jaana, Carpén, Olli, Virtanen, Anni, Hautaniemi, Sampsa

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Longitudinal single-cell RNA-seq analysis reveals stress-promoted chemoresistance in metastatic ovarian cancer von Zhang, Kaiyang, Erkan, Erdogan Pekcan, Jamalzadeh, Sanaz, Dai, Jun, Andersson, Noora, Kaipio, Katja, Lamminen, Tarja, Mansuri, Naziha, Huhtinen, Kaisa, Carpén, Olli, Hietanen, Sakari, Oikkonen, Jaana, Hynninen, Johanna, Virtanen, Anni, Häkkinen, Antti, Hautaniemi, Sampsa, Vähärautio, Anna

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PRISM: recovering cell-type-specific expression profiles from individual composite RNA-seq samples von Häkkinen, Antti, Zhang, Kaiyang, Alkodsi, Amjad, Andersson, Noora, Erkan, Erdogan Pekcan, Dai, Jun, Kaipio, Katja, Lamminen, Tarja, Mansuri, Naziha, Huhtinen, Kaisa, Vähärautio, Anna, Carpén, Olli, Hynninen, Johanna, Hietanen, Sakari, Lehtonen, Rainer, Hautaniemi, Sampsa

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Serum FGF19 predicts outcomes of Kasai portoenterostomy in biliary atresia von Nyholm, Iiris, Hukkinen, Maria, Pihlajoki, Marjut, Davidson, Joseph R, Tyraskis, Athanasios, Lohi, Jouko, Heikkilä, Päivi, Hänninen, Satu, Andersson, Noora, Eloranta, Katja, Carpén, Olli, Heikinheimo, Markku, Davenport, Mark, Pakarinen, Mikko P

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FUNGI: FUsioN Gene Integration toolset von Cervera, Alejandra, Rausio, Heidi, Kähkönen, Tiia, Andersson, Noora, Partel, Gabriele, Rantanen, Ville, Paciello, Giulia, Ficarra, Elisa, Hynninen, Johanna, Hietanen, Sakari, Carpén, Olli, Lehtonen, Rainer, Hautaniemi, Sampsa, Huhtinen, Kaisa

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Abstract GMM-043: CTDNA PROFILING TO PREDICT PROGNOSIS AND OPTIMIZE TREATMENT IN HIGH-GRADE SEROUS OVARIAN CANCER von Oikkonen, Jaana, Zhang, Kaiyang, Salminen, Liina, Huhtinen, Kaisa, Schulman, Ingrid, Andersson, Noora, Carpén, Olli, Hietanen, Sakari, Grénman, Seija, Lehtonen, Rainer, Hynninen, Johanna, Färkkilä, Anniina, Hautaniemi, Sampsa

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Abstract A59: RNA-seq analysis of high-grade serous ovarian cancer patients before and after chemotherapy reveals chemoresistance-associated genes and pathways von Jamalzadeh, Sanaz, Zhang, Kaiyang, Häkkinen, Antti, Huhtinen, Kaisa, Hynninen, Johanna, Andersson, Noora, Mansuri, Naziha, Carpén, Olli, Erdogan, Erkan, Dai, Jun, Vähärautio, Anna, Hietanen, Sakari, Oikkonen, Jaana, Lehtonen, Rainer, Hautaniemi, Sampsa

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WNT2 activation through proximal germline deletion predisposes to small intestinal neuroendocrine tumors and intestinal adenocarcinomas von Aavikko, Mervi, Kaasinen, Eevi, Andersson, Noora, Pentinmikko, Nalle, Sulo, Päivi, Donner, Iikki, Pihlajamaa, Päivi, Kuosmanen, Anna, Bramante, Simona, Katainen, Riku, Sipilä, Lauri J, Martin, Samantha, Arola, Johanna, Carpén, Olli, Heiskanen, Ilkka, Mecklin, Jukka-Pekka, Taipale, Jussi, Ristimäki, Ari, Lehti, Kaisa, Gucciardo, Erika, Katajisto, Pekka, Schalin-Jäntti, Camilla, Vahteristo, Pia, Aaltonen, Lauri A

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Transcription factor GATA6: a novel marker and putative inducer of ductal metaplasia in biliary atresia von Soini, Tea, Pihlajoki, Marjut, Andersson, Noora, Lohi, Jouko, Huppert, Kari A, Rudnick, David A, Huppert, Stacey S, Wilson, David B, Pakarinen, Mikko P, Heikinheimo, Markku

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Molecularly Defined Adult Granulosa Cell Tumor of the Ovary: The Clinical Phenotype von McConechy, Melissa K, Färkkilä, Anniina, Horlings, Hugo M, Talhouk, Aline, Unkila-Kallio, Leila, van Meurs, Hannah S, Yang, Winnie, Rozenberg, Nirit, Andersson, Noora, Zaby, Katharina, Bryk, Saara, Bützow, Ralf, Halfwerk, Johannes B G, Hooijer, Gerrit K J, van de Vijver, Marc J, Buist, Marrije R, Kenter, Gemma G, Brucker, Sara Y, Krämer, Bernhard, Staebler, Annette, Bleeker, Maaike C G, Heikinheimo, Markku, Kommoss, Stefan, Blake Gilks, C, Anttonen, Mikko, Huntsman, David G

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