Investigation of Genotypes of Borrelia burgdorferi in Ixodes scapularis Ticks Collected during Surveillance in Canada von OGDEN, N. H, MARGOS, G, AANENSEN, D. M, DREBOT, M. A, FEIL, E. J, HANINCOVA, K, SCHWARTZ, I, TYLER, S, LINDSAY, L. R

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The dynamic changes of dominant clones of Staphylococcus aureus causing bloodstream infections in the European region: results of a second structured survey von Grundmann, H, Schouls, L M, Aanensen, D M, Pluister, G N, Tami, A, Chlebowicz, M, Glasner, C, Sabat, A J, Weist, K, Heuer, O, Friedrich, A W

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WebACT—an online companion for the Artemis Comparison Tool von Abbott, J. C., Aanensen, D. M., Rutherford, K., Butcher, S., Spratt, B. G.

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eBURST: Inferring Patterns of Evolutionary Descent among Clusters of Related Bacterial Genotypes from Multilocus Sequence Typing Data von FELL, Edward J, LI, Bao C, AANENSEN, David M, HANAGE, William P, SPRATT, Brian G

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The multilocus sequence typing network: mlst.net von Aanensen, David M., Spratt, Brian G.

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Rapid Sequence-Based Identification of Gonococcal Transmission Clusters in a Large Metropolitan Area von Martin, Iona M. C., Ison, Catherine A., Aanensen, David M., Fenton, Kevin A., Spratt, Brian G.

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Multilocus Sequence Typing and Evolutionary Relationships among the Causative Agents of Melioidosis and Glanders, Burkholderia pseudomallei and Burkholderia mallei von GODOY, Daniel, RANDLE, Gaynor, SIMPSON, Andrew J, AANENSEN, David M, PITT, Tyrone L, KINOSHITA, Reimi, SPRATT, Brian G

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Displaying the relatedness among isolates of bacterial species – the eBURST approach von Spratt, Brian G., Hanage, William P., Li, Bao, Aanensen, David M., Feil, Edward J.

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Hierarchical and spatially explicit clustering of DNA sequences with BAPS software von Cheng, Lu, Connor, Thomas R, Sirén, Jukka, Aanensen, David M, Corander, Jukka

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Changing Epidemiologic Profile of Quinolone-Resistant Neisseria gonorrhoeae in London von Martin, Iona M. C., Ison, Catherine A., Aanensen, David M., Fenton, Kevin A., Spratt, Brian G.

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Conservation of vaccine antigen sequences encoded by sequenced strains of Streptococcus equi subsp. equi von Frosth, Sara, Morris, Ellen Ruth A., Wilson, Hayley, Frykberg, Lars, Jacobsson, Karin, Parkhill, Julian, Flock, Jan‐Ingmar, Wood, Tim, Guss, Bengt, Aanensen, David M., Boyle, Ashley G., Riihimäki, Miia, Cohen, Noah D., Waller, Andrew S.

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Widespread emergence of OmpK36 loop 3 insertions among multidrug-resistant clones of Klebsiella pneumoniae von David, S, Wong, JLC, Sanchez-Garrido, J, Kwong, H-S, Low, WW, Morecchiato, F, Giani, T, Rossolini, GM, Brett, SJ, Clements, A, Beis, K, Aanensen, DM, Frankel, G

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Phandango: an interactive viewer for bacterial population genomics von Hadfield, J, Croucher, NJ, Goater, RJ, Abudahab, K, Aanensen, DM, Harris, SR

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Multilocus sequence typing of Candida albicans: strategies, data exchange and applications von Bougnoux, Marie-Elisabeth, Aanensen, David M., Morand, Serge, Théraud, Magali, Spratt, Brian G., d’Enfert, Christophe

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Genomic epidemiology describes introduction and outbreaks of antifungal drug-resistant Candida auris von Kappel, D, Gifford, H, Brackin, A, Abdolrasouli, A, Eyre, DW, Jeffery, K, Schlenz, S, Aanensen, DM, Brown, CS, Borman, A, Johnson, E, Holmes, A, Armstrong-James, D, Fisher, MC, Rhodes, J

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Evolutionary Genetics of the Capsular Locus of Serogroup 6 Pneumococci von MAVROIDI, Angeliki, GODOY, Daniel, AANENSEN, David M, ROBINSON, D. Ashley, HOLLINGSHEAD, Susan K, SPRATT, Brian G

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Diversification of colonization factors in a multidrug-resistant escherichia coli lineage evolving under negative frequency-dependent selection von McNally, A, Kallonen, T, Connor, C, Abudahab, K, Aanensen, DM, Horner, C, Peacock, SJ, Parkhill, J, Croucher, NJ, Corander, J

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Pneumococcal capsule synthesis locus cps as evolutionary hotspot with potential to generate novel serotypes by recombination von Mostowy, RJ, Croucher, NJ, De Maio, N, Chewapreecha, C, Salter, SJ, Turner, P, Aanensen, DM, Bentley, SD, Didelot, X, Fraser, C

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Molecular tracing of the emergence, adaptation, and transmission of hospital-associated methicillin-resistant Staphylococcus aureus von Mcadam, P. R., Templeton, K. E., Edwards, G. F., Holden, M. T. G., Feil, E. J., Aanensen, D. M., Bargawi, H. J. A., Spratt, B. G., Bentley, S. D., Parkhill, J., Enright, M. C., Holmes, A., Girvan, E. K., Godfrey, P. A., Feldgarden, M., Kearns, A. M., Rambaut, A., Robinson, D. A., Fitzgerald, J. R.

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Comparing genomic variant identification protocols for Candida auris von Li, X, Muñoz, JF, Gade, L, Argimon, S, Bougnoux, M-E, Bowers, JR, Chow, NA, Cuesta, I, Farrer, RA, Maufrais, C, Monroy-Nieto, J, Pradhan, D, Uehling, J, Vu, D, Yeats, CA, Aanensen, DM, D'Enfert, C, Engelthaler, DM, Eyre, DW, Fisher, MC, Hagen, F, Meyer, W, Singh, G, Alastruey-Izquierdo, A, Litvintseva, AP, Cuomo, CA

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