Identification of a long non-coding RNA-associated RNP complex regulating metastasis at the translational step von Gumireddy, Kiranmai, Li, Anping, Yan, Jinchun, Setoyama, Tetsuro, Johannes, Gregg J, Ørom, Ulf A, Tchou, Julia, Liu, Qin, Zhang, Lin, Speicher, David W, Calin, George A, Huang, Qihong

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SPLICE-q: a Python tool for genome-wide quantification of splicing efficiency von Costa, Veronica R. Melo, Pfeuffer, Julianus, Louloupi, Annita, Orom, Ulf A., Piro, Rosario M.

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Determination of primary microRNA processing in clinical samples by targeted pri-miR-sequencing von Conrad, Thomas, Ntini, Evgenia, Lang, Benjamin, Cozzuto, Luca, Andersen, Jesper B., Marquardt, Jens U., Ponomarenko, Julia, Tartaglia, Gian Gaetano, Orom, Ulf A. Vang

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Molecular mechanisms of long ncRNAs in neurological disorders von Vučićević, Dubravka, Schrewe, Heinrich, Orom, Ulf A

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Analysis of RNA–DNA Triplex Structures In Vitro and In Vivo von Postepska-Igielska, Anna, Blank-Giwojna, Alena, Grummt, Ingrid

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Cellular Fractionation and Isolation of Chromatin-Associated RNA von Conrad, Thomas, Ørom, Ulf Andersson

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miRNA Biogenesis: Methods and Protocols von orom, Ulf Andersson Vang

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Immunoprecipitation of DNA:RNA Hybrids Using the S9.6 Antibody von Gibbons, Hunter R., Aune, Thomas M.

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Characterization of R-Loop Structures Using Single-Molecule R-Loop Footprinting and Sequencing von Malig, Maika, Chedin, Frederic

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Mapping Transcriptome-Wide and Genome-Wide RNA–DNA Contacts with Chromatin-Associated RNA Sequencing (ChAR-seq) von Limouse, Charles, Jukam, David, Smith, Owen K., Fryer, Kelsey A., Straight, Aaron F.

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Knockdown of Nuclear lncRNAs by Locked Nucleic Acid (LNA) Gapmers in Nephron Progenitor Cells von Nishikawa, Masaki, Yanagawa, Norimoto

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Simultaneous Detection of RNAs and Proteins with Subcellular Resolution von Kwon, Sunjong, Chin, Koei, Nederlof, Michel

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Proteomics-Based Systematic Identification of Nuclear Proteins Anchored to Chromatin via RNA von Hiragami-Hamada, Kyoko, Tani, Naoki, Nakayama, Jun-ichi

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In Vivo Crosslinking of Histone and RNA-Binding Proteins von Kim, Yong-Eun, Kim, Kyoon Eon, Kim, Kee K.

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Analyzing RNA–DNA Triplex Formation in Chromatin von Maldonado, Rodrigo, Längst, Gernot

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Targeting Polyadenylation for Retention of RNA at Chromatin von Ntini, Evgenia, Vang Ørom, Ulf Andersson

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Identification of cis-Elements for RNA Subcellular Localization Through REL-seq von Yin, Yafei, Shen, Xiaohua

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Transcriptome-Wide Mapping of Protein–RNA Interactions von Bi, Xianju, Shen, Xiaohua

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Identification of Chromatin Binding Sites for Long Noncoding RNAs by Chromatin Oligo-Affinity Precipitation (ChOP) von Rossi, Marianna Nicoletta, Maione, Rossella

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Mapping RNA–Chromatin Interactions In Vivo with RNA-DamID von Cheetham, Seth W., Brand, Andrea H.

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