DeepDTA: deep drug-target binding affinity prediction von Öztürk, Hakime, Özgür, Arzucan, Ozkirimli, Elif

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Membrane Active Peptides and Their Biophysical Characterization von Avci, Fatma Gizem, Akbulut, Berna Sariyar, Ozkirimli, Elif

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A comparative study of SMILES-based compound similarity functions for drug-target interaction prediction von Öztürk, Hakime, Ozkirimli, Elif, Özgür, Arzucan

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Classification of Beta-lactamases and penicillin binding proteins using ligand-centric network models von Öztürk, Hakime, Ozkirimli, Elif, Özgür, Arzucan

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Carvacrol Enhances the Antimicrobial Potency of Berberine in Bacillus subtilis von Atas, Basak, Aksoy, Cemile Selin, Avci, Fatma Gizem, Sayar, Nihat Alpagu, Ulgen, Kutlu, Ozkirimli, Elif, Akbulut, Berna Sariyar

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Labels in a haystack: Approaches beyond supervised learning in biomedical applications von Yakimovich, Artur, Beaugnon, Anaël, Huang, Yi, Ozkirimli, Elif

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Structure-function investigation of 3-methylaspartate ammonia lyase reveals substrate molecular determinants for the deamination reaction von Saez-Jimenez, Veronica, Maršić, Željka Sanader, Lambrughi, Matteo, Shin, Jae Ho, van Havere, Robin, Papaleo, Elena, Olsson, Lisbeth, Mapelli, Valeria

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Live Cell Imaging of Peptide Uptake Using a Microfluidic Platform von Yuce, Merve, Ozkirimli, Elif, Sariyar Akbulut, Berna, Ulgen, Kutlu

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Src kinase activation: A switched electrostatic network von Ozkirimli, Elif, Post, Carol Beth

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Editorial: Machine Learning Methodologies to Study Molecular Interactions von Yakimovich, Artur, Özgür, Arzucan, Doğan, Tunca, Ozkirimli, Elif

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The Uptake Mechanism of the Cell-Penetrating pVEC Peptide von Akdag, Ihsan Omur, Ozkirimli, Elif

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A Survey on Causal Discovery: Theory and Practice von Zanga, Alessio, Ozkirimli, Elif, Stella, Fabio

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Machine-learning-based adverse drug event prediction from observational health data: A review von Denck, Jonas, Ozkirimli, Elif, Wang, Ken

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Exploring chemical space using natural language processing methodologies for drug discovery von Öztürk, Hakime, Özgür, Arzucan, Schwaller, Philippe, Laino, Teodoro, Ozkirimli, Elif

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The importance of a conserved residue of the H10 helix in β-lactamase von Avcı, Fatma Gizem, Ölmez, Elif Özkırımlı, Akbulut, Berna Sarıyar

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A novel methodology on distributed representations of proteins using their interacting ligands von Öztürk, Hakime, Ozkirimli, Elif, Özgür, Arzucan

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Aminopurine derivatives as putative SopE inhibitors von Ozbuyukkaya, Gizem, Ozkirimli Olmez, Elif, Ozergin Ulgen, Kutlu

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Generation of an Analog-sensitive Syk Tyrosine Kinase for the Study of Signaling Dynamics from the B Cell Antigen Receptor von Oh, Hyunju, Ozkirimli, Elif, Shah, Kavita, Harrison, Marietta L., Geahlen, Robert L.

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Analysis of Membrane Translocation Simulations using Dimensionality Reduction von Alaybeyoglu, Begum, Ozkirimli, Elif

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A Framework for Improving the Generalizability of Drug–Target Affinity Prediction Models von ÖZçelİk, Riza, Bağ, Alperen, Atil, Berk, Barsbey, Melİh, ÖZgür, Arzucan, Ozkirimli, Elif

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