Computational Biology of Transcription Factor Binding von Ladunga, Istvan

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Identification of Promoter Regions and Regulatory Sites von Solovyev, Victor V., Shahmuradov, Ilham A., Salamov, Asaf A.

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Regulatory Regions in DNA: Promoters, Enhancers, Silencers, and Insulators von Riethoven, Jean-Jack M.

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Large-Scale Identification and Analysis of C-Proteins von Sorokin, Valery, Severinov, Konstantin, Gelfand, Mikhail S.

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Sequence Analysis of Chromatin Immunoprecipitation Data for Transcription Factors von MacIsaac, Kenzie D., Fraenkel, Ernest

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Inferring Protein–DNA Interaction Parameters from SELEX Experiments von Djordjevic, Marko

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Computing Chromosome Conformation von Fraser, James, Rousseau, Mathieu, Blanchette, Mathieu, Dostie, Josée

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Practical Computational Methods for Regulatory Genomics: A cisGRN-Lexicon and cisGRN-Browser for Gene Regulatory Networks von Istrail, Sorin, Tarpine, Ryan, Schutter, Kyle, Aguiar, Derek

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Annotating the Regulatory Genome von Montgomery, Stephen B., Kasaian, Katayoon, Jones, Steven J.M., Griffith, Obi L.

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Evolution of cis-Regulatory Sequences in Drosophila von He, Xin, Sinha, Saurabh

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Three-Dimensional Structures of DNA-Bound Transcriptional Regulators von Shrivastava, Tripti, Tahirov, Tahir H.

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Genome-wide expression QTL mapping reveals the highly dynamic regulatory landscape of a major wheat pathogen von Abraham, Leen Nanchira, Croll, Daniel

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Orphan Genes in Crop Improvement: Enhancing Potato Tuber Protein without Impacting Yield von Tanvir, Rezwan, Wang, Lei, Zhang, Amy, Li, Ling

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Estrogen Induces c-myc Transcription by Binding to Upstream ERE Element in Promoter von Rehman, Nazia, Khan, Shahrukh, Manzoor, Shumaila, Abubakar, Muhammad, Sami, Rokayya, Alharthy, Saif A., Baty, Roua S., Jafri, Ibrahim, Alsubhi, Nouf H., Qari, Sameer H., Shahid, Ramla

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ChIP-seq analysis of androgen receptor in LNCaP cell line von Tao, Sifeng, He, Haifei, Chen, Qiang

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